Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U577094 in the current build, Tomato 200607 #2

Unigene SGN-U314156

Unigene Basic Information

Unigene ID:	SGN-U314156
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314156
mRNA sequence:	Length: 2368 bp

>SGN-U314156 Tomato 200607 #1 (25 members)
ATGGGAAGCAAGTATTCTAAGGCAACAAATTCCATAAATGATGCTTTAAGCTCGAGTTATCTCGTTCCTTTTGAAAGTTATCGAGTTCCT
TTAGTAGATTTGGAGGAAGCAACTAATAATTTTGATCACAAGTTTTTAATTGGACATGGTGTCTTTGGGAAGGTTTACAAGGGTGTTTTG
CGTGATGGAGCAAAGGTGGCCCTGAAAAGGCGTACACCTGAGTCCTCACAAGGTATTGAAGAGTTCGAAACAGAAATTGAGACTCTCTCA
TTTTGCAGACATCCGCATCTGGTTTCATTGATAGGATTCTGTGATGAAAGAAATGAGATGATTCTAATTTATAAATACATGGAGAATGGG
AACCTCAAGAGACATTTGTATGGATCAGATCTACCCACAATGAGCATGAGCTGGGAGCAGAGGCTGGAGATATGCATAGGGGCAGCCAGA
GGTCTACACTACCTTCATACTAGAGCAATTATACATCGTGATGTCAAGTCTATAAACATATTGCTTGATGAGAATTTTGTGCCAAAAATT
ACTGATTTTGGAATATCCAAGAAAGGGACTGAGCTTGATCAAACCCATCTTAGCACAGTAGTGAAAGGAACTCTCGGCTACATTGACCCT
GAATATTTTATAAAGGGACGACTCACTGAAAAATCTGATGTTTATTCTTTCGGTGTTGTTTTATTCGAAGTTCTTTGTGCTAGGTCTGCC
ATAGTTCAATCTCTTCCAAGGGAGATGGTTAATTTAGCTGAATGGGCAGTGGAGTCGCATAATAATGGACAGTTGGAACAAATCGTAGAT
CCCAATCTTGCAGATAAAATAAGACCAGAGTCCCTCAGGAAGTTTGGAGATACAGCGGTAAAATGCTTAGCTTTGTCTAGTGAAGATAGG
CCATCAATGGGTGATGTGTTGTGGAAACTGGAGTATGCACTTCGTCTCCAAGAGTCTGTTATTTAAGATATTTTTGTTTTTCTGAGTTTT
ATATAGAAAAAGGTAAACTTTGAAAACTTGAATTGCTATACCTGTGGATCCGTCGACCATTTTATTAGGTGCGTCCGGCTGTTACACATA
TTGTATATGGTTCTTATTAAGTTGTTCAGACATTTTCTTATTGTAAAGAGGCAAAAAGGAAGTTTGCTGCTTTGACATAGTCATCTAAAA
CTATATACATTCAACTTTCAGAATGGAACTATAAAAGTTTGTGGAGCAATTCTAAATGTTACTCAACCTGTTCACAAAATGACTATTGTA
GAGCAATAATGGTTATAATATATAACCATTATTGAGTAATATTTTTGTAGTAGTATTGCCCAAGTCCATTAGCGGAAAGGTAATTTTCTT
TTCGGTTCTCTCTTCCACAATAGCTATCAATCTCTCTGTCTTCTCGCTAAATTTCCTCAGTTGTGGTATAATCAGAGGTTCCTCAAGCCT
TCTGTTTTGTATACATATATTTGTGATTTTCATCTATCATGCTTACTGTTAGGAGTTCATATTGCTTGATGAGAATTTTGTGGCAAAAAT
TACTGATTTTGGACGATTCAAGAAGCTTGATCAAACCCATGTTACCACAATAGTAAAGGAACTTTTGGTTACCTTGACCCTGAATATTAT
CAAACTAGTCAGCTGACAGAAAAATCTGATGTTTATTCTTTCGGTGTTGTTTTATTAGAAGTTATTTGTGCTAGGCCTGCGCTGGATTCA
TCTCGTTCGAGGGAGATGGTCAGCTCAGTTAAATGGGCAAAGGAGTGTCAGAAGAACGGACAGTCGGAACGAATTATAGATCCCAATCTT
GTTGGCAAAATAAGACCAGATTCCCCCAGGAAGTTTGGAGAAACAGCTGTGAAATGCTTAGCTGAAACTGGCGTAAACAGGCCATCAATG
GGTGAGGTGCTCGAGAAACTGGACTATGCACTTCATCTCTAAGAGCCTGTCATTCAAGAAAACAGTACCATCCCTATCCGCGAGCAAATC
AATGATTTCAGTCATGTTGATGACACTTCCTCTGCTTCTTCGGTCAAAATTGGGCTGATCTCTAGTATGAATGCGTTCAGATTTTGCTCA
AGAAAACAGCCGGGAGAAGTTCAATTAATGGTTGCACTCCATGGGAACCAACTATTCCAAGCCAACAACTTCCATAAATGATGCTTCCAA
TTTGAGTAATCGCGTTCCTTTTGAAAGTTTTCGAGTTCCTTTTGTAGATTTGCAGGAAGCAACTAATAACTTTGATGACAAGTTTCTGAT
TGGAGTGGGTATATTTGGTAAGGATTACAGGGGTGTTTTGCGTGATGGTACAAAGGTGGCCCTGAAAAGACATAAGCCTGAGTCTCCACA
AGGTATTGAAGAGTTCCGAACAGAAATC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Pto	Pseudomonas syringae pv tomato resis.	protein kinase

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	19
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum pimpinellifolium	vSpimpmRNA		8	1
undefined	vShabmRNA		29	1

mRNA member sequences (25)

Alignment image suppressed for unigene with 25 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (19)

Annotations (manual: 1 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	128958	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	116

Preceding Unigenes (2)

Unigene	Build
SGN-U214446	Lycopersicon Combined #3
SGN-U214448	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer