Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U577224 and SGN-U578755 in the current build, Tomato 200607 #2

Unigene SGN-U314190

Unigene Basic Information

Unigene ID:	SGN-U314190
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314190
mRNA sequence:	Length: 1795 bp

>SGN-U314190 Tomato 200607 #1 (50 members)
ATCGGCCGAATTGACTAGAGTGACCATTCCAAAAGTATAAAATTTTCTTCATATTCTTAGCTTGAACTAGAGTTTCTTAAAGTAGTTCTA
CGTTTCACCACAACTCATGTTAGTATTTTGTGTCTTGAATGCTCTTTTTAGTTTGTGGCTATTAATTTCCTTATGGCCTCATCAAAAACA
GGGAAAATTATGAGGACAAGATATTCCAAATCACTATTTTACTAACAAATGGATGGCTGAAAATGAATTCTACCCAAAAAAAAGAAAATA
GAAGCCAAAATCAATCATTTCATCTTATCTATCATGCACATAAATTGTTTGAGGAAAATACTGAGTGAGGGGTAAAAAAACCAGCTGGAA
AGAAAGAAGAACAATGGAAGCTCTGTTATCTTCCACTACTCTTCAACTCAAACCCCTTCATCCACCCTCTTCTTTCTCTTCTCTTCACTC
TCCATTTTCTTCTATTTCTGTTCTTAGAGTAAAGGGTAGCAAAAAAGCTGAAACTTTTATTCAAAGAAGCAATTTTTCCACTGTTTTGCC
ACTTAGAGTCTCTGCTAGTTCTCAAGCAGCAGCTGCTGAAACATCCACAAGCATTTCTATTCCTTCTGAAATGAAAGCTTGGAGTTATAC
TGATTATGGAAGTGTTGATGTTTTGAAGTTGGAGTCCAATGTTGCAGTTCCTGACATTAAGGAAGATCAAGTCTTGATTAAGATTGTTGC
TGCTGCTCTTAACCCTGTTGATTTTAAACGACGGCTCGGAAAATTTAAGGCCACTGATTCTCCACTTCCAACTGTGCCAGGTTATGATGT
TGCTGGTGTGGTAGTGAAAGTTGGTAGTCAGGTAAAGGGATTAAAAGAAGGGGATGAAGTATATGGAGATATACATGAGAAAGCATTAGA
TGGACCAAAGCAATTTGGATCCTTAGCTGAGTACACTGCTGTTGAAGAGAAACTAGTTGCTTTGAAACCCAAGAATCTTAGTTTTGCGGA
GGCTGCTGCTCTTCCTCTAGCTATTGAGACTGCTTATGAAGGTCTTGAGAAAGCTGGATTTTCTTCTGGCAAATCCATTCTTGTTTTGGG
AGGTGCTGGCGGTGTTGGATCCCTAGTAATCCAGCTTGCTAAACATGTATTTGGTGCTTCTAAAGTAGCAGCTACCTCTAGCACAGGGAA
GTTGGAACTCCTGAAAAGCTTAGGAGCTGATTTAGCTATTGACTACACTAAGGAGAATTTTGAAGATCTGCCTGACAAGTTTGATGTTGT
TTATGATTCAGTTGGTCAGGGTGAAAAGGCGGTGAAGGTAGTGAAGGAAGGTGGGAGTGTGGTAGTGCTAACAGGGGCAGTAACTCCACC
AGGTTTTAGATTTGTGGTGACATCAAATGGAGAGATGTTGAAGAAACTGAACCCATACTTGGAAAGTGGGAAGGTGAAACCAGTGATAGA
TCCAAAGGGACCATTCTCATTTGATAAGGTTGTGGATGCTTTCTCTTATCTTGAAACTGGAAGAGCCACTGGGAAAGTTGTTATTCATCC
CATTCCTTGAAAGTTAGCTCTTATTTTGTACAATTTCTAATACATTTAGGGAAAAGGAGAAGTTTTTGTTCCTCAAAGCCTATTGTGGCA
TGTGGTTGATGAAAATAAGATGTATCTATGTTGATCATGTTGGACACACAAATAATTACTTAGGAGGATTTTTGTGTTCACTCTTTCTTA
GACATGGTTTTACCAACTTTTGAATCCATAGCAAATTGAATTTTAAAAAAATGAAACATGTTTTCATGAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (19)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	4
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	3
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	2
Solanum lycopersicum	LA	Leaf Mature leaves	6589	9
Solanum lycopersicum	LB	Leaf Mature leaves	3316	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	6
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	3
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	4
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2

mRNA member sequences (50)

Alignment image suppressed for unigene with 50 aligned sequences.
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Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101421	GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491)	210
2	118870	Alcohol dehydrogenase GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	27
5	131663	Alcohol dehydrogenase GroES-like Quinone oxidoreductase/zeta-crystallin - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	6

Preceding Unigenes (1)

Unigene	Build
SGN-U213459	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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