Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U580902 in the current build, Tomato 200607 #2

Unigene SGN-U314262

Unigene Basic Information

Unigene ID:	SGN-U314262
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314262
mRNA sequence:	Length: 1267 bp

>SGN-U314262 Tomato 200607 #1 (2 members)
CATTAATTAGCAATTAATCCATAACCATTATGGCTGCCAAAAATTCATAGATGAAGTTTGCTATCTTCTTCGTTGTTCTTTTGACGACCA
CTTTAGTTGATATGTCTGGAATTTCGAAAATGCAAGGGATGGCTCTTCGAGACATACCCCCACAAGAAACATTGCTGAAAATGAAGCTAC
TTCCCACAAATATTTTGGGACTTTGTAACGAACCTTGCAGCTCAAACTCTGATTGCATCGGAATTACCCTTTGCCAATTTTGTAAGGAGA
AGACGGACCAGTATGGTTTAACATACCGTACATGCAACCTGTTGCCTTGAACAATATCAATGATCTATCGATCGATCTATCTATCTATTT
ATCTGTCTCTGCACGTATAGTGTTGTCTGTACCTTTGGTGTGAAGAATATGAATAAAGGGATACATATATCTAGATATATTCTAGGTAAT
GTCCTATTGTATTTAAAATTTGTAGCAATGATTGTTTGAATAAAAACCTACCATGAGTGAAATAATTATTCCGCATTAGAAAAAAAGAAA
AAAAAAATTGCGGGGGGGGCCGGGAACCCATTTCCCCTGAAGGAGATCCTCATAAATGTTCCATTGGCTAATAGACTCGTGTGGAGAGGC
TTCATCTGGCCTGTTGCTGCTTACAGAGAGTACTTGAACGGAGACCTTATTGACCCTAATGTCTAATTTTTGATTACCCTTGTTTAAATT
TCTCTTGTTGGAGACTCGTGGAATTATACTTTCACTTGTTTATATCGATGAAAGATTGTGAATTCTCTATACCATGTGTTGCTAGATAAT
GGCTAGGAGTACCTATTGAAAAATGGATGGGTTCCTTGCTTGGAATTCGAGACTGAGCACGGATTTGTGTACCGTGAGAACCATATGTCA
CCAGGATACTACGATGGCAGATACTGGACCATGTGGAAGTTGCCCATGTTTGGGTGCACTGATGCAACCCACGTCTTGGCTGAGGTGCAG
GAGGCAAAGAAGGCTTACCCTCAGGCATGGGTCCGTATCATCGGATTCGACAATGTTCGTCAAGTGCAGTGCATCAGTTTCATCGCTTAC
AAGCCCGAAGGATACTAAAATGCCAATTGTTAATTATGTGATGTATAACTGACCCTATGTATTTAGGGGAAGCTTGTTTGAATCCTCCTT
AAAGTTTTTCTCTGGAGAAACTGTAGTAATTATACTTTGCTGTGTTCCCTTCATCTTTTGAATTAATGGCATTTGCTTTAATACTAATCT
GCTTCTG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
TOM2A11	fruit-specific protein TOM2A11

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1

mRNA member sequences (2)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101403	Dehydrin - Biological Process: response to stress (GO:0006950) - Biological Process: response to water (GO:0009415) Haloacid dehalogenase-like hydrolase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152)	270
2	118508	Ribulose bisphosphate carboxylase small chain - Cellular Component: ribulose bisphosphate carboxylase complex (sensu Magnoliophyta) (GO:0009573) - Biological Process: carbon utilization by fixation of carbon dioxide (GO:0015977) - Molecular Function: ribulose-bisphosphate carboxylase activity (GO:0016984)	74
5	129006	Ribulose bisphosphate carboxylase small chain - Cellular Component: ribulose bisphosphate carboxylase complex (sensu Magnoliophyta) (GO:0009573) - Biological Process: carbon utilization by fixation of carbon dioxide (GO:0015977) - Molecular Function: ribulose-bisphosphate carboxylase activity (GO:0016984)	70

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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