Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U578052 in the current build, Tomato 200607 #2

Unigene SGN-U314276

Unigene Basic Information

Unigene ID:	SGN-U314276
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314276
mRNA sequence:	Length: 812 bp

>SGN-U314276 Tomato 200607 #1 (38 members)
GAACAACGAGTATCTTGTTCAAAGGTCTATATAATTCACTAATCTATAAAGTTGGACAACATATACAAAGATCAACAGTTCTTTGATTTG
GTTTAAGCATTTTCAGAGAAATAGTAAAAGGGGGTTACGTCGGAGCAGATCCAACACATTGAAGAGGTGATGGCTCCAAAGCAGCCGAAT
ACAGGGATATCTGTTGGTCTAAACAAAGGCCATGTTGTGACCAAGAAGGAATTAGCTCCACGCCCTTCTGACAGAAAAGGGAAAACAAGC
AAAAGAATACACTTTGTGAGGAGTCTTATCAGAGAAGTTGCTGGATTTGCTCCATATGAGAAGAGGATCACTGAGCTTCTCAAAGTTGGA
AAGGACAAGCGTGCCTTGAAGGTAGCCAAGAGGAAGTTGGGTACTCACAAGAGGGCAAAGAGGAAGAGAGAAGAGATGTCTAGTGTTCTC
CGCAAGATGAGGGCTACTGGAGGTGGTGAAAAGAAGAAGTGAGGCCTGTATCCATCACTACTGATGTTTGAAGGACCCAGTTAGTTAATT
CACCAGCTTTTACGTGTGCAATGTATTTTTGTTTTCAAGAAAGAGGACTTGTGATCGAAAAGTTCCCTGTTTATGTTCGATGAATATTTT
GGAATTAGTGATTCTTTAGACATTTTTGCAAAAAAAAAAAAAAAAAAAAAATGCTTTTCTGGTATTATTTGTGTTGACTATCTGCTTGAT
CTTTGAAATGACTTGGGCCAAGAAATTTGCCCATGTTGCCCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAA
AA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (18)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	2
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	3
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	4
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	3
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	3
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	5
Solanum lycopersicum	cTSC	seed	2256	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (38)

Alignment image suppressed for unigene with 38 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	102304	Ribosomal protein L36E - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	17
2	119340	Ribosomal protein L36E - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	17
5	129678	Ribosomal protein L36E - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	17

Preceding Unigenes (1)

Unigene	Build
SGN-U213267	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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