Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U578903 and SGN-U580347 in the current build, Tomato 200607 #2

Unigene SGN-U314352

Unigene Basic Information

Unigene ID:	SGN-U314352
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314352
mRNA sequence:	Length: 1584 bp

>SGN-U314352 Tomato 200607 #1 (5 members)
AAATTTCAAAACCATGTAACATGATAATTGGTCGCAACATCATCTGCGTGCCAAAACAACAAAAACCAAAACAAACCACTTAACATGCTA
ATTTGGCAACATAATGGATAAAAAAGGCAATTTAGACAAGAAAATAGGAACATTAGAGCTTGAAGACTCAAATTATATATATTGTTGCGT
CTCTTTGTGTGGGTCTGTCTCACTGTTGATCCCATTTGTCCTCCACGCTTTCTTTTTTTCTCCTCTCTTTCCTCATTCAGCATTCTTCTT
CTTTTCTTAGCACAGCTCGACCACTTCTTCTTTTCTTGTCAAGACCCCAAGATTCCCTTTTTGTCTCTTTATTTTAACTCTTCCTCTATC
TTTGGCAAAAAAAACTAAAACTTTATTTCATACAGATTTGTGGGTGTTCTTTGTTTTTGTTAAATCGACAGTATGATGAGTGAATCAATG
GCCTGAAGTGGATTCTTGAAAAATGAGTAAAGGAAATTGAAGAGTGAAAATATAGAAACAAATATGAGAACCCTTTGTGATGTTTGTGAA
AGTGCTGCGGCAATACTTTTCTGTGCTGCTGATGAGGCTGCTCTCTGCCGTTCTTGTGACGAAAAGGTACATTTGTGCAACAAGCTTGCA
AGTCGACATGTAAGAGTTGGGCTAGCTGACCCCAGTAAAATCCAGCGTTGCGACATATGCGAAAATGCACCTGCTTTCTTTTATTGTGAG
ATCGATGGAAGTTCCCTTTGTTTGCAATGTGATATGATTGTCCATGTTGGAGGTAAACGAACCCATGGAAGATATCTCCTTATAAGGCAG
AGGATTGAGTTTCCGGGGGATAAATTGGGCCCTTCAAATGAGCAAGGATTGCCATCTACTGAACAAGGTGATGTAAGGAGGGAGACTGCA
CAGCCCTTTAAACTCCCTATGATAGACAATCACCAACCAAACAGGGAGACTGCTATGACAGCAGTAGAAAATAACGTGAATAATAGCGTA
AAAGTGGAGAATGAGTTGATTGACCTTAACTCCAGACCTCAAAGGATGCATGGTCAAACGTCAAATAATCAGGAACAAGTAATGGACATG
CTTGGTGGTAGCAATCATGAGTCTGTCGGCGTGGTTCCTGATGGGCCCTTCAAAAGAGAACCAGAGAAGTGATCAAGATGTGAGCTGCTG
CCATTCCAAATTTCAAACTTGAATTATGAATTGGAGTTGCCGGCCCCAGCTGAGTTCTATGCAATGTCAAAGCTTTAAGAGAAGCTTTTG
AACTAGCCGGGACCAAGTTGAGGTATTTCTTGAGTGAAGAGCTCTCTGAAGTTCATTATTCAACCACTTCATGCATATACTTTGAGAAGA
GGATCAGAAAGAAATTCTGCCATCTCGCTTTGGAGAGAGGATAAGGCTGCAGTCACCACATTTGCCTCTGTAATTTTCTGTAATGAGTAA
TGAGAAAAAACAATCTCTACAGATTCAAGATGAACTGTATAGCAGNGACATTCATTTATTGTTGTTTTTATTCATCAAATTTCCACCATT
ACTATTGTAATTCATCTGGTTTGAATTCTGTTAAACTTTATAATCATTCAAGGG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101374	Homeodomain-like	561
2	120675	Zinc finger CONSTANS-type - Molecular Function: DNA binding (GO:0003677) - Molecular Function: zinc ion binding (GO:0008270) Zinc finger B-box - Cellular Component: intracellular (GO:0005622) - Molecular Function: zinc ion binding (GO:0008270)	8
5	132489	Zinc finger CONSTANS-type - Molecular Function: DNA binding (GO:0003677) - Molecular Function: zinc ion binding (GO:0008270) Zinc finger B-box - Cellular Component: intracellular (GO:0005622) - Molecular Function: zinc ion binding (GO:0008270)	5

Preceding Unigenes (2)

Unigene	Build
SGN-U212579	Lycopersicon Combined #3
SGN-U228395	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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