Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U577789 in the current build, Tomato 200607 #2

Unigene SGN-U314377

Unigene Basic Information

Unigene ID:	SGN-U314377
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314377
mRNA sequence:	Length: 2379 bp

>SGN-U314377 Tomato 200607 #1 (56 members)
TCACTCTAAATTCACCCAAAAAAAATAATAAAAATCCACCATTTTCTCTTCTTATCCTTTTTTTTTTTTAATTATTGTGAAAAAAAATCT
AAAATTTGGTGTAAAAATGGCTGGAAATGGAGTATTTGCAGAAATAATTGATGGAGAAGTGTACAAATATTATTGTGAAGGAGAATGGAA
AAAATCAGCTTCTGGAAAATCTGTTGCTATTATTAATCCTACTACAAGAAAGACACAATACAAAGTTCAAGCATGTACACAAGAAGAGGT
GAACAAAGTAATGGAAATAGCAAAAGCAGCACAAAAATCATGGGCTAAAACACCACTATGGAAAAGAGCAGAGTTACTTCATAAGGCAGC
TGCAATTTTGAAAGAACACAAAGCCCCTATTGCTGAATGCCTTGTTAAAGAAATTGCAAAACCAGCTAAAGATGCTGTCACCGAGGTTGT
GAGATCTGGTGATTTGGTTTCTTACACTGCTGAAGAAGGAGTTAGAATTCTAGGGGAGGGTAAGTTCTTGGTATCTGATAGTTTCCCTGG
AAATGAAAGGACCAAATACTGTCTAACATCCAAGATACCGTTGGGTGTGATTCTGGCGATTCCTCCTTTCAACTATCCGGTCAATCTTGC
CGTCTCCAAGATTGCTCCTGCACTGATTGCTGGAAACTCTTTAGTCCTCAAGCCTCCAACTCAGGGTGCTGTGGCTGCCCTGCATATGGT
GCATTGCTTCCACTTAGCTGGATTCCCTAAAGGCCTTATCAGTTGTGTGACCGGAAAAGGTTCTGAAATCGGAGATTTTCTCACTATGCA
TCCTGGAGTAAACTGTATAAGCTTCACTGGTGGAGACACCGGTGTTGCAATCTCGAAGAAAGCAGGAATGGTCCCTCTACAGATGGAGCT
GGGAGGAAAGGATGCTTGTATCGTGCTCGAGGATGCTGATTTAGATTTGGCTGCTGGAAACATTGTGAAAGGAGGATTTTCTTACAGTGG
TCAAAGATGCACAGCCGTTAAGGTCGTGTTGGTGATGGAATCTGTTGCTGACATTCTTGTTGAGAAGGTAAATGCCAAAGTGGCAAAGTT
AACCGTTGGGCCACCCGAAGATAATTGTGATATCACTCCAGTTGTCTCCGAGTCATCCGCAAATTTCATCGAGGGGCTGGTCATGGACGC
AAAGGAGAAAGATGCAACATTTTGCCAGCCATACAAGAGAGAAGGCAACCTTATCTGGCCCTTGTTGTTAGACAATGTTAGGCCGGACAT
GAGAATCGCTTGGGAAGAACCCTTCGGTCCAGTTTTGCCCGTTATTCGGATCAACTCAGTCGAAGAAGGAATTCACCACTGCAATGCTAG
CAATTTTGGTCTGCAGGGTTGTGTGTTCACCAAAGACATCAACAAAGCAATACTGATCAGTGATGCAATGGAAACCGGAACCGTTCAAAT
TAACTCAGCTCCAGCTCGTGGACCGGATCATTTTCCGTTCCAGGGTATTAAGGACAGTGGAATTGGATCACAAGGGATTACTAACAGTAT
TAACATGATGACTAAAGTGAAGACCACTGTGATCAATTTGCCAACCCCTTCTTATACTATGGGGTAAATTAATCACTATTTTTTGCTTTA
GAAATTTGACAATAATAATTAAGTATCCATGTTGTGGATGTTAATAAGTTCACACCAATTATTGTTCATTTCTTTCGTTGACCTTATGAA
GATTAATATTGGTGGGTTAGTATTTAGCATTATTCAAAAAAAAAAAAAAACTTCGATTGTTGTTGCTAGCTATTTGTTGTTTCTTGTGCT
TCGTTTATCACATTATTCTACTTTGTATGACATAATAATATGCTTCCTCTATAGTCTATTGTTTGTTTTGTCTTAAAAAAAAAAAAAAGA
AAGCTGGAGTGGAAGTTGAGAGAAATGAAGAAAATGGATCCTTCACTAAGGAAGGAGTTTGTAAGGCAATCAAACCGGTAATGAATGATG
AGAGTGAAGAGGGGTGTAAAATAAGGGCGAATCGCGCAAAGTGGAGAGAGTTCTTGTTGAGTAAAGGGCTTGAGGATTCTTACATTGATG
GTCTTGTGCAGAAGCTACAATGTCTACTCTGATTGCAGAACACTGTTTCGACAGCTCGAACCTGTAACTTTGTAACCTCCTAGTAGTTTG
GTGCCAATAAAGTTCTTGTTGAGTAAAAGACTTGAGGATTCTTACATTAATGGTCTTGTGCAAAAGCTACAATGTTTACTATGATTGCAA
GAGACTGTTTCCACAGCTCGAACCTGTAACGTTGTAACCACAGCCTAGTAGTTTGCCAATAAGTTCTAGTTGCCAATAAAAAATGGGATG
TTTGTTTCTTGTTTCTACTACTAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (18)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	3
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	3
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	5
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	4
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	4
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	vSlycmRNA		8362	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	19
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (56)

Alignment image suppressed for unigene with 56 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101476	Aldehyde dehydrogenase - Biological Process: metabolism (GO:0008152) - Molecular Function: oxidoreductase activity (GO:0016491)	111
2	118481	Aldehyde dehydrogenase - Biological Process: metabolism (GO:0008152) - Molecular Function: oxidoreductase activity (GO:0016491)	93
5	130449	NAD-dependent aldehyde dehydrogenase - Molecular Function: oxidoreductase activity (GO:0016491) Aldehyde dehydrogenase - Biological Process: metabolism (GO:0008152) - Molecular Function: oxidoreductase activity (GO:0016491)	10

Preceding Unigenes (1)

Unigene	Build
SGN-U214796	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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