Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U580902 and SGN-U583317 in the current build, Tomato 200607 #2

Unigene SGN-U314459

Unigene Basic Information

Unigene ID:	SGN-U314459
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314459
mRNA sequence:	Length: 1435 bp

>SGN-U314459 Tomato 200607 #1 (7 members)
TAGGGCGATTGGCGGCCACATCGGCCGAATTGAAATCACCACAACTTTCTCCTTCTGCTCATCAATTAGCAATTAATCCAAAACCATTAT
GGCTGCCAAAAATTCAGAGATGAAGTTTGCTATCTTCTTCGTTGTTCTTTTGACGACCACTTTAGTTGATATGTCTGGAATTTCGAAAAT
GCAAGTGATGGCTCTTCGAGACATACCCCCACAAGAAACATTGCTGAAAATGAAGCTACTTCCCACAAATATTTTGGGACTTTGTAACGA
ACCTTGCAGCTCAAACTCTGATTGCATCGGAATTACCCTTTGCCAATTTTGTAAGGAGAAGACGGACCAGTATGGTTTAACATACCGTAC
ATGCAACCTGTTGCCTTGAACAATATCAATGATCTATCGATCGATCTATCTATCTATTTATCTGTCTCTGCGCGTATAGTGTTGTCTGTA
CCTTTGGTGTGAAGAATATGAATAAAGGGATACATATATCTAGATATATTCTAGGTAATGTCCTATTGTATTTAAAATTTGTAGCAATGA
TTGTTTGAATAAAAACATACCATGAGTGAAATAATTATTCCACATTAATTCACGTATTTATTTCACTTATGATACGTATTTTTGTTCCTT
TCGCGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCTCTGAGGGATCCTTCTCAATCTTCTACTAACAATC
AAGACAGAGCCGGACCATCAGATTTTCAGTCTTTTTCAGATTCTATGAAGTCTCGGTTTAGTGCAATGTCAATGAGATGCAAAGAATCTT
TAACCAAGAGTTCAAGGGGTTGGAAGGAGAGATTTTTCTCTCGCAACAGTTCAACATCAGACAATGTTCCCGAACCTAGGAATGAAGTGA
GGGCAGCTGTTGCCACTGTATCACACATGATGGACCATCTGGAAACTACAGATAGCAGAACCAGTTCTGCTGAATCAAATATACTGGACA
CTACTTTACCTATCAGAGATGCTGAGCAGCATATACCTGAGAGTGATGGTATTCATTCTTTAAATGAGGATAGTAGGCAATCCCCGTGTG
CTGCAAGTGGTTCAAACTGAAGTTTTATATGAGTTGAAGCATTTTCTCTTCAAGGTAGATACTCTTGCCAGCATCGATGATATATGGTGC
GCATCTTACTGGGTGTGGTGAAACATTAATCCTTTGAAGTGCAACACTGAATGTTAAGATATAGAGGGATGGATGTCGTCATTTTGTCCA
AACCATGTATATGTATGATTATATAGATGTAAATTGACCCATTCTGGGTAGTAGTACTGATGACTTCAACTGTTCTCTTTAATCTTACAT
GAAACCCCCCTTCATAATCTTCATAGACATTGCTGGACAGTTAATTGACCAAGGTTTTCTTGGGATTCACTAGCACCAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
TOM2A11	fruit-specific protein TOM2A11

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	2

mRNA member sequences (7)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101372	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	566
2	119012	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	23
5	129952	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	14

Preceding Unigenes (1)

Unigene	Build
SGN-U212581	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Description:
Event Web URL:

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