Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U578671 in the current build, Tomato 200607 #2

Unigene SGN-U314790

Unigene Basic Information

Unigene ID:	SGN-U314790
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314790
mRNA sequence:	Length: 1337 bp

>SGN-U314790 Tomato 200607 #1 (39 members)
AGAAAAGTCGTGGATAGGCGGCCGCGTGTGCCCCAATAGATACACTCTAATGCTACCGCCGATTCACCAATCTTATCCATCAGCCTCGCC
GATTTTGCTCCAATTTGAGAGAGAATTGAAATTGGTGAATCTGATATGGCTATGCATGCTGTTCAATACGACTCTTATGGCAGCGGCTCC
GCTGGATTGAAGCATGTGGAAGTTCCTGTGCCTACTCCGAAGAAGGATGAAGTCTTGATAAAAGTGGAGGCTACAAGCATAAATCCTTTT
GACTGGAAAATTCAGAAGGGCATGCTTCGTCCACTTCTTCCTACCAAGTTTCCTTTTATTCCTTCTATCGACGTGGGAGGAGAGGTTGTA
GAGGTAGGATCTAATGTAAAAAGATTCAAGGCTGGTGACAAGGTTGTGGCTATGCTCAATGCCCTGAATGGAGGTGGATTGGCTGAATAT
GCGGTGGCTAATGAGAGTTTGACTGTTCCAAGACTCGCTGAAGTATCAGCTGCAGAAGGTGCAGGTCTTATTGTTGCAGGTCTTACAGCT
CTTCAGGCCCTTGTCAATCATTCTGAGGTTAAGCTCAATGGAACTGGACCCCGGAAGAACATTCTAGTTACGGCTGCCTCAGGTGGTGTC
GGTCACTATGCTGTTCAATTGGCAAAACTTGGTAACACTCATGTTACTGCCACCTGCGGAGTGCGCAACATTGATCTTGTGAAGAGCTTA
GGAGCAGATGAGGTTCTTGATTACAATACCCCAGAGGGAGCAGCTCTTAAGAGTCCGTCAGGCCAAAAATATGATGCAGTGATTCACTGC
ACAACAGGCATCCCTTGGTCTACCTTTGAGCCTAATTTAAGTTCAAGTGGAAAGGTTATAGATATAACTCCTGGAGTTAGCGCCATGTGG
ACCTTTGCGGTGAAGAAATTGACCTTCTCAAAGAAACAGCTGGTGCCACTGCTTCTGATTCCGAAGAAGGAAAATCTGGAATTGATTGTT
GGGCTTGTGAAGGAAGGGAAACTGAAAACAGTAATCGACTCAAAATTTCCTCTGAGCAAGGCTGAAGATGCTTGGAGCAAGAGTATTGAT
GGACATGCCACCGGAAAGATTATTGTGGAGCCATAGAGCAGTGTTCTCCCAAATTATGTAATAAAATGTTTGCGAGGCTTGTGCAGTATG
ACCAATTAAATATATTCAGCTGTAACAACTTTTATTTGCCTCCTATGTATCATTTTCCCTGAAAATTGGGTTTACTACGGGGCATTTTAC
TTGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	5
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	9
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	6
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	2
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	5
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	4
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	1

mRNA member sequences (39)

Alignment image suppressed for unigene with 39 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 0 | blast: 2 | go: 1 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101421	GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491)	210
2	118870	Alcohol dehydrogenase GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	27
5	129620	Alcohol dehydrogenase GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	18

Preceding Unigenes (2)

Unigene	Build
SGN-U212904	Lycopersicon Combined #3
SGN-U212908	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer