Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U571827 in the current build, Tomato 200607 #2

Unigene SGN-U314974

Unigene Basic Information

Unigene ID:	SGN-U314974
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314974
mRNA sequence:	Length: 1844 bp

>SGN-U314974 Tomato 200607 #1 (9 members)
TTGATGCAGCAGAGAGGTAGAATTAGTAATTGTAAATCAAGGTCCTTTTCTAGATCTCGTCTTGCTGTTGAAGGTTCTTAACCTCTTCAG
CTTCTATCATGGCTGCCATTGCTCCAGAGGTAGGAGAAGAGCGTGAGATTCAAAAGAGTTATTGGATGGAGCAAACTAGTGAACTCAATT
TGGAGGCAATGATGCGTGATTCTGCAGCATCTGATCTTGACAAAGAGGATAGGCCTGAGGTGCTTTCACTGCTCCCTTCATATGAAGGTA
AATCCGTGTTGGAATTGGGTGCTGGTATTGGCCGTTTCACTGGGGACTTAGCCGAGAAGGCTGGGGAGCTTGTAGCAGTGGACTTTATTG
AAGAAGTGACTAAGAAGAATGAAAGTATCAACGGGCACCACAAGAATGTCAAGTTTGTGTGTGCTGATGTGACTTCACCAGATTTGACGG
TTTTACCTGAATCAGTGGACTTGATATTTTCTAACTGGCTACTGATGTATCTTTCCAACGAAGAGGTTCAGGACCTTGCGGAGAGAATGA
TCAAATGGTTGAAAGTTGGTGGCTATATATTTTTTAGAGAGACATGCTTCCATCAATCAGGAGACCACAAGGGAAAGAACAACCCAACCC
ACTATCGAGAGCCTCGATTTTATACAAAGGTTTTCCAAGAATGTACTTTAAAGGATGATGCTGGAAAATCATATGAACTTTCTCTTATTG
GTTATAAGTGCATTGAAACTTATGTAAAAAACAAAAAGAATCAAAATGAGATTTGCTGGATATGGCAGAAGGTTCATTCCGAGGATGACA
GGGGATTCCAGCATTTCTTGGACACTGTTCAGTACAAGTCTAATGGTATACTGAGATATGAACGTGTGTTCGGGGCAGGCTTTGTCAGCA
CAGGAGGAATTGACACCACCAAAGAATTCGTTGCCATGATGGATCTTCAGCCTGGCGAAAAGGTCCTTGACGTTGGCTGTGGCATTGGAG
GAGGTGACTTTTACATGGCTGAGAAGTATGATGTTCATGTTGTAGGCATTGATCTTTCAGTTAACATGATCACATTGGCTTTTGAACGTG
CTATTGGGCGCAAATGCGCGGTTGAATTTGAGGTTGCTGATTGCACGGTGAAAACATATCCTGAAGAATCATTCGATGTGATATACAGCC
GGGACACTATCCTGCACATCCAGGACAAGCCTGCATTATTCAGATCTTTCTATAAGTGGCTGAAGCCTGGAGGCAGAGTCCTCATAAGCG
ATTACTGCAAAAAGGCAGGACCAGCTTCCGAAGACTTTGCAGCGTATATCAAACAAAGAGGCTACGATTTACATGATGTTGAAGCATATG
GACAGATGCTTAGAGATGCTGGTTTCAACGAAGTTATTGCTGATGATCGAACTGAGCAGTTCATGCAAGTTCTCCAGAAAGAGTTGGATA
CTGTGGAGAATGAAAGAGAGTTATTTATCCAAGAATTTTCTGAACAAGACTACAATGATATAGTTGGAGGTTGGAAGGCCAAGCTAGTTA
GAAGTTCATCTGGTGAGCAGAGATGGGGTTTGTTCTTTGCCAAGAAAAATTGATGTGTGTTATTGTGTACTGTTGTTTCATTGAAGATAA
TAAAAATGATTTAAGTTTGATGTTGTAATGATTCGAGGCTCTACCCTATGTAGACCCCATTTATAGGATTACACTGGCTATGTTGTTTAT
TTTAATGATTCCTACTCTGTCGGTTTAATGTAATATGTGAGTTGGTTAAGATCATGTTATTAATAAAAGTTTGTCATAAAGATTTAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCGGGGGGGGGGC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101467	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757)	119
2	119477	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757) Methyltransferase type 11 Generic methyltransferase - Molecular Function: methyltransferase activity (GO:0008168)	15
5	129811	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757) Methyltransferase type 11 Generic methyltransferase - Molecular Function: methyltransferase activity (GO:0008168)	15

Preceding Unigenes (1)

Unigene	Build
SGN-U220622	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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