Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U571835 in the current build, Tomato 200607 #2

Unigene SGN-U314976

Unigene Basic Information

Unigene ID:	SGN-U314976
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314976
mRNA sequence:	Length: 1813 bp

>SGN-U314976 Tomato 200607 #1 (9 members)
CGGGCTGCAGGATTCGGACGAGGCTCTGGGATTCTCTCTCTTTCTGTAATATCAACTCATTGATAGTCAGTCCCCTGTTTTCCCATTTTC
ATTGCCATTTCGTTTCGATTGCATTTTTTTTTTCACAAAAACAAAACAAATTTCACTTCTAGCTGATTGATGCAGCAGAAAGGTAGAAAC
AATAACCGTAGATCCAGGAGCTTCTCTAGATCTCGTCTTGCCATAGAGGGTTTCTAGCAATTTATTTCTCTACCATATACTAATTCCCAA
TCAACATTCTCTTCTTCAAACATTCCAAATCATCACATCACATTTCTCTTATCATCAATCAACCATGGCTGCTGCTTCAGGACAAGAGCG
TGAGGTTCAAAAGAGTTATTGGATTGAGCACACTGCGGAACTCACTGTCGAGGCCATGATGCTCGACTCTAAAGCAGCGGATCTCGACAA
AGAAGAGAGACCTGAGGTGCTCTCTCTGCTTCCGCCGTATGAAGGAAAAACTGTGTTGGAACTGGGTGCAGGTATTGGCCGATTCACTGG
TGAATTAGCCCAGAAAGCTGGACAGCTTATAGCATTGGACTTTATTGAAGGCGCAATTAAGAAGAATGAAAACATAAATGGGCACTATAA
GAATGTCAAGTTCATGTGTGCTGATGTGACTTCCCCGAATTTGATTTTTTCACCGGAATCGGTGGACTTGATATTTTCTAACTGGCTACT
GATGTATCTTTCTGATGAAGAGGTTAAGGCTCTTGTTGAGAGAATGGTTATATGGTTGAAAGTCGGTGGTCACATATTTTTCAGAGAGTC
ATGCTTCCATCAATCAGGAGACCACAAGCGAAAGAACAACCCAACCCACTATCGAGACCCTAGCTTTTATACAAAGGTTTTCAGAGAATG
TCACGTAAATGCTGGTGATGGAAAAATCATTTGAACTTTCTCTTGCTGGTTGCAAGTGCATTGGAGCTTATGTGAAGAACAAAAAGAATC
AAAATCAGATTTGCTGGACGTGGCAGAAGGTTACTTCTAAGGATGACATGGAATTTCAGCGTTTCTTGGATACTGTTCAGTACAAGTGTA
GTGGCATACTACGCTATGAACGAGTCTTTGGACAAGGTTTTGTTAGCACAGGAGGACTTGAAACTACAAAAGAATTTGTAGCCATGTTGG
ATCTTCAGCGTGGCCAAAAAGTCCTTGATGTTGGCTGTGGCATTGGAGGAGGTAACTTCTACATGGCTGAAAAGTATGATGTTCATGTTG
TTGGCATTGACCTGTCTATCAACATGATATCTTTTGCTCTTGAGCGTGCTATTGGTCTCAAGTGTGCTGTTGAATTTGAGGTTGCTGATT
GCACCAAGAAAACATATCCTGATTGTACATTTGATGTCATATACAGTCGGGATACTATCCTTCACATCCAGGACAAACCTGCACTGTTCA
GATCTTTCTACAAGTGGCTGAGACCAGGAGGCAAAGTTCTTATAAGTGATTACTGCAAAAGAGCTGGACCAGCATCAAAAGAATTCGAAG
GTTATATTAAGCAAAGGGGGTATGATTTACATGATGTTGAAGCATATGGGCAGATGCTCAGAGATGCGGGTTTTCATGAAGTTGTGGCCG
AGGATCGTACTGAACAGTTCATTAAGGTTCTGCAAAAGGAGTTAGATACTGTGGAGAAGGAAAGAGAATCTTTTATCCATGAGTTCTCTG
AACAAGACTATAATGAAATAGTTGGAGGTTGGAAGTCCAAGCTAATCAGGAGTTCATCTGGTGAGCAGAGGTGGGGCTTGTTCATTGCCA
AGAAGAAATGATT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AF328858	phosphoethanolamine N-methyltransferase

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1
Solanum lycopersicum	vSlycmRNA		8362	2

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101467	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757)	119
2	119477	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757) Methyltransferase type 11 Generic methyltransferase - Molecular Function: methyltransferase activity (GO:0008168)	15
5	129811	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757) Methyltransferase type 11 Generic methyltransferase - Molecular Function: methyltransferase activity (GO:0008168)	15

Preceding Unigenes (1)

Unigene	Build
SGN-U224814	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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