Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U581381 in the current build, Tomato 200607 #2

Unigene SGN-U315226

Unigene Basic Information

Unigene ID:	SGN-U315226
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315226
mRNA sequence:	Length: 794 bp

>SGN-U315226 Tomato 200607 #1 (37 members)
GCGATTGGCGGCCAATCGGCCGAATTGCTCTACAACTCTTCTTCTACAAAAATACATATACTTTCTCTCTCTACAAAAAAAAACAAACAA
ATATCACAATATACAGAAAAGTTCTAGAGAGAGAAAGAGAAGACAATGGCTTACTCGAAGATTATCGTTGTTGCTTTCATGTTCGCTTTG
GTCGCCGGATCTGCTTTTGCTCAAGCTCCGGGAGCTTCTCCGGTAGCTTCACCGAAACCGTCTCCGGTACCGGTAGCAAAACCTCCAACT
CCTGTTGTTACCCCAGTATCTGCTCCTTCAGTATCTCCTGCTGCAAGTTCACCTTCTGATTCTCCAGTTTCATCTCCACCAGCTCCACCA
ACCGTTGAGACTCCGGCTTCTGCTCCTACCGCCGGTGGTGCTCTTGCTCCGTCCATCGGTGCTACACCAAGCGGTTCTCCAACTTCCTCT
CCAAATGCTGCATCCTTGAACAGAGTCGCTGTTGCTGGATCTGCCGTCGTAGCTATCTTCGCTGCGTCTTTGCTGTTTTAGATCTGAGGA
GATATTTGCATTTGGATTTGCTGGAGAGAGGGATGTTTATGATTTTAGGATTTTTATATTTTTAGTTCATCTTACTCGTTGATGTTTATT
ATTCGTTTTGCTACTTTTTCTTTTACCTTTGGGTGATGGTGACGATTACGTACATGCTATTGATTTGATTTTTACTTATGGTTATTGTTT
ATTAATTATCATCACCATTGTTATTACTATTATTACGACTATTATAAATTCTTCGTTTAATAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	2
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	4
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	9
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	4
Solanum lycopersicum	cTSD	seed	1504	2

mRNA member sequences (37)

Alignment image suppressed for unigene with 37 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (7)

Annotations (manual: 1 | blast: 0 | go: 0 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118924		25
5	129379	Glutelin - Molecular Function: nutrient reservoir activity (GO:0045735)	23

Preceding Unigenes (1)

Unigene	Build
SGN-U214418	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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