Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U580125 in the current build, Tomato 200607 #2

Unigene SGN-U315303

Unigene Basic Information

Unigene ID:	SGN-U315303
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315303
mRNA sequence:	Length: 1205 bp

>SGN-U315303 Tomato 200607 #1 (10 members)
CTCTTTAGATGCCAATTTTATCATTTCTTATATATAAACTAAAATTTTACCCAACTTGGTACTCTCTGCATTTATAAATCTTTAATTTGC
ATTATACATTTCTAACTCCATTTTACATAACTAGACTTAATAGTAATATGGACCCATGGAAAGACCTAACCGGAAAAGTAGTGATGGTGA
CCGGAGCATCATCGGGGATCGGGCTATAGTTCTGTATCGATTTAGCCAAAGCCGGTTGCAGAATCATCGCTGCTGCTCGTCGTGTTGACA
AACTGAAATCTCTCTGCGATCAAATTAACAGTAATTCAGAGGAAACCCCTCGTGCAATCGCCATCGAACTTGATGTTGCTGCTGATAGTG
CTACAATTGAATCCGCTGTAAAAATAGCTTGGGAGGCCTTTGGACGTATCGATGCCTTGGTTAACAATGCAGGCGTAAGAGGGAGCGTGA
GCTCTTCAGTGGAATTGACAGAGGAGGAATGGAACAATACATATAACACGAATCTACGAGGGGCATGGATGGTTTCGAAATATGTATGTA
AGCGTATGATCGATGCTAAACAGGGCGGAGGATCTGTTATTAACATCACTTCGATGGCGGGTTTAAATCGTATAGCAGTGCCAGGAACTA
CTGCTTACGCTACTTCAAAGATGGCTCTAGACATGGTTACTAAGATAATGGCGATTGAATTGGGCGGAGAGAATATCAGATTGAACTCGA
TATCGCCAGGAGTTTTCAAATCAGAGATAACAGAGAGCCTAGTTGAACAGAAATGGTTTCACAAATTTCTTTATAAAACTCTTCCTACTA
GATATCTTGGAACGACAGATCCAGGTTTAACGTCTCTCATTCGATACTTAATTCATGATTCTTCTGAGTATGTAACGGGTAATGTTTTCA
TCGTCGATGGTGGAGCTAGCTTACCAGGTGTCCCCATTTTCTCATCACTCTAGCTCAAATGGACATGTAAAAGAAAATAATACAATACTT
TCAATTATCGAAGCAAGTGAAAAATGTATTGTAATACTTGGTGTGATTTAGTATGTTGTTACCTTCCACTAGAGTGTTTGCGATTTGATC
TTTGATGATTTTTTATTATTAAATTGAAAATTAAATCAATTTAATATGTTTAATAGATATTTATCGATTTGGTTGTCTAAAGGAGAGCAA
ATATGTATCAATCGAGAATCGATTTGGATTGGTGT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOS	suspension cultures	8026	3

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 2 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101390	Glucose/ribitol dehydrogenase - Biological Process: metabolism (GO:0008152) - Molecular Function: oxidoreductase activity (GO:0016491)	342
2	118763	Short-chain dehydrogenase/reductase SDR - Biological Process: metabolism (GO:0008152) - Molecular Function: oxidoreductase activity (GO:0016491) Glucose/ribitol dehydrogenase - Biological Process: metabolism (GO:0008152) - Molecular Function: oxidoreductase activity (GO:0016491)	31
5	129224	Short-chain dehydrogenase/reductase SDR - Biological Process: metabolism (GO:0008152) - Molecular Function: oxidoreductase activity (GO:0016491) Glucose/ribitol dehydrogenase - Biological Process: metabolism (GO:0008152) - Molecular Function: oxidoreductase activity (GO:0016491)	30

Preceding Unigenes (2)

Unigene	Build
SGN-U214300	Lycopersicon Combined #3
SGN-U214301	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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