Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U567966, SGN-U567968, and SGN-U567969 in the current build, Tomato 200607 #2

Unigene SGN-U315308

Unigene Basic Information

Unigene ID:	SGN-U315308
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315308
mRNA sequence:	Length: 2799 bp

>SGN-U315308 Tomato 200607 #1 (32 members)
AAAACATGGAAATTAAATCAAAAATTGTTGAAAGGAATAAATAATATAATTATGTAGTAGATTTTTTTTTTTTCACAAATAAAGCCAAGA
TTTCACATCATTATCATAATAGTTATGATACCTTCATCATTATTATAGGGTGGCTCTTTTTGTGAAAGAGGAAAAGTCAGAAGAATAATA
AATATACTATTTTTTTGATAGGGTTTGGTATTAAATTTCCTTTTCCTTTCTTCTTGTGGCTTTTTCTTGGTTATGCCGTTTCAATTTCAG
GGTGAAGTAGACTTCAATTCCAAAAGAATAATATTGTTTAGGACATGGATCAAGTCTGCCTTTTCTCAGATAACTTTGGGTATCAAGCTT
TCTCATTTCAGGAAGTCCTCGATTGGCGGTTCCTCATCTGTGGAGATTTCCTTGTTGTTTCCTTTGTCAATTGCACATAGTGAACATCTG
CTCTTGAGTGATCAGTACAGGAGACCATATGCCATTTCCACATAAGCTAAGTGTTGGATGTTTAGTGCAGTTCAACTAGTAAGCAGCACA
CCTTATGATGTCAATTGTGACTGTACTGTTAACTACCTCATGCAAGTTTTTTATTTCTAGCGCATCACCGATAAGACACCCTTTCAGGAC
CCTTTGGAAACCATCCTCTGAGGGCTAAATTCAGAAGACATATGTATGACGTTTTTTATGCATTGTTGAGAATTAGTTAGCTCTTTACAC
ACTTGCTTCGGATTTGGTAGTTTCTAGAGACCTCTTCTTCACAATTCGTTTGACTGAAGACTTGGTATCAGACAGAAGTGTTATTTGGAG
GCAAGGGGCTAATGTGTTTTTGAGAAGAAAGGTTCTGTGACTTGGACATATAATTTGATATGTTGAATTGAGCTATTTGAATCTCAGTTA
GCTTTGAAGTGGTATCATGATGCACTGCAGCACTTGCCTTTGCTTGCTTTCTCTCCCCTGTTACAGTTTTGGTCTTTCTTCTGCCATATA
TCTTACAAATAAGGCTGTGAAGCCCATCCGTCCTATCATTGCTGATTCTGCCCTCATCAGTTTTGCAGAAGGAAATTAAGGGGGATTTTG
CTGAATCAGCCAGGCCATAGTTCCTTTTAGTATTTTTTTTTCTTTTACAGTCATTCCGAGACAGAAATCCATTTTGTTTATGTGTGTGTT
GTCCCTATACTCCATTTAATAAGAGTCCTACGTGCTATTGAAGCTGCTGAAATGGAAAGGTACCAGATAATTAAAGAAGTTGGTAATGGT
ACATTTGGAAATGTTTGGCGTGCACTTAATAAGCAGACTGGTGAAGTGGTTGCGATTAAAAAGATGAAGAGGAATTATTATTCGTGGGAA
GAATGCATAAACTTGAGAGAGGTCAAGTCTCTGAGAAAAATGAACCATTCAAATATCGTGAAGCTCAAGGAAGTGGTCAGGGAGAACGAC
ATTTTGTACTTCGTGTTTGAATACATGGAGTGCAATCTATACCAACTTATGAAGGACAGAGCAAAGCTTTTCTCAGAATCCGAAGTGAGA
AATTGGTGCTTCCAAGTATTTCAAGGTCTTGCTTACATGCATCGACAAGGATATTTTCATCGTGACCTTAAGCCAGAGAACTTGTTGGTT
TCGAAAGAAATAATTAAAGTTGCTGATTTTGGTCTTGCTCGGGAGATCAATTCTCAGCCTCCATATACGGAATATGTATCAACACGTTGG
TATCGTGCTCCTGAAATTCTTCTCCAGTCACCCATCTATGGTCCTGCTGTCGATATGTGGGCAATGGGTGCTATAATGGCTGAGTTGTTT
AGTCTTCGTCCTCTGTTTCCAGGTTCAAGTGAAGCAGATGAGATCTACAAAATATGCAGTGTTATAGGGACCCCAACAAAGAGGAACTGG
GCTCAGGGACTTGAACTTGCTAGTGCTATCAACTACCAATTTCCGCAGGTTGCTGGTGTAGATATCTCTTTGCTAGTTCCGTCTGCCAGT
GAAAATGCTATTAGTCTAATCACATCTCTTTGTTCATGGGATCCTCGTAAGAGGCCAACGGCAATCGATGCTCTTCAGCATCCTTTTTTC
CAGAGTTGCTTTTACGTACCTCCATCACTACGCACCAAGGCTGCTGTTGCTAAGACCCCTCCTTCTGCTGTTGTGCGGGGTGCAGTGGAG
CAGAAGTACAAGTGGTCATCTGGGTTGTCACACAATCCCAAACCTAGCAGCAACTTCTCAACTGTCAAGTCACAGCTGCCGTTTAACGCA
GGTGTTCAAAGGAAGCTGGATATGAATTATCAGGATCCGACGAGGAATGATAAATTCCTGCATGGCTCTGTCAACCAACAACCAAAATAT
CGACCTCCTGGAAGGAACATTCCGAGCGATCCAATGGTTGGTTCCAGAGTGCAGAATTTTGCCGTTTCTGATGCAGCTGACAAGCTGGGG
AACATGAATATTGGCTCTGGCAGAGTTCCTACAATGCAGCCAGTAGTTAAGCCAATGAAGGCAGGAGGATGGCATGGACAGCACGACTTG
TTCCATGGACGGTCTAAAGAGTTTCTTCCGGGAAGAAGCTTTTCGAGGAAAGTTGCTGGATGAATAAATGTCAAAGCTGAGAGTGCCCCT
ACTTTGTTCTAGTGTTCTGTTCGCGATAATAGTCGTTATGTGCATGGCTAAATTTGATGGTGAAGCCAGCAGTCTTTGTGCTTTCAATAT
TTTCGTTTAGTTTCTGGTGATACTGTTGCATCAACAATGTTTTGAATAATGTATTTCCTTGAATAAATGGTTTTTCTCAACTCTCAAAAA
AAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (15)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	4
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	3
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	3
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	4
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	3

mRNA member sequences (32)

Alignment image suppressed for unigene with 32 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (4)

Annotations (manual: 2 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118420	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	253
5	132202		6

Preceding Unigenes (1)

Unigene	Build
SGN-U214843	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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