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This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U585215 and SGN-U585217 in the current build, Tomato 200607 #2

Unigene SGN-U315407

Unigene Basic Information

Unigene ID:	SGN-U315407
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315407
mRNA sequence:	Length: 1637 bp

>SGN-U315407 Tomato 200607 #1 (32 members)
CAACACCAAAACTTGTTAAGAAAAATGTCTTCTTATTCAGAGCTATCAAATCTTCCGATTCGTGAAATTCCAGGGGACTATGGTTTCCCT
ATAATTAGCGCGATTAAAGATCGATACGATTATTTCTATAACCAAGGTGAAGATGCTTGGTTCCATAACAAAGCTGAAAAATACAAATCT
ACTGTTGTCAAAATCAACATGGCACCAGGTCCATTCACATCTAATGACTACAAATTGGTAGCCTTTTTAGATGCCAATAGCTTTGTTTGC
ATGTTTGATAATTCCCTCATTGATAAAACTGACACTCTTGGTGGTACATTTAAGCCTGGTAAAGAATACTACGGTGGTTATCGTCCCGTC
GCGTTTATCGATACCAAAGATCCAAACCACGCAGCATTAAAAGGCTACATTTTATCATCATTCGCAAAGCGACATAACTTATTCATTCCT
CTGTTCAGAAACACGTTATCCGATCATCTTTTTAATAATCTCGAAAAACAGGTTACTGAACAGGGGAAAGCAGATTTCAATGCTTTGCTT
CCGACTATGACGTTTGATTTCATTTTTCGTTTGCTTTGTGATCAGAAAAATCCGTCTGATACAGTTCTTGGCGCTCAAGGACCAGAACAT
CTACGTAAATGGCTTTTCCCACAGCTAATTCCGTCCTTGAGCGCCAAGAAACTTCCTAACATCATAGAAGATATGCTCTTCCATAATTTT
TTAATACCATTTGGTTTTATAAAGAGTGATTACAACAAACTTGTTGATGCATTTAGCAAGTCTGCTGTGTCCATGTTGGATGAAGCAGAA
AAACTTGGAATCAAAAGAGAAGAAGCTGTACAAAACATTCTTTTTCTCGTGGGGATCAATATGTTTGCGGGGCTGAACGCCTTTTTCCCT
CATCTATTCAGGTTTGTGGGCGAAGCAGGGGCTAGTCTACACACACAACTTGCTAAAGAAATCAGGAGTGTTATTAAAGAAGAAGGTGGT
GCAATCACATTATCAGCGATTAACAAAATGAGTTTGGTCAAATCGGTAGTGTACGAGACATTGAGACTTCGCCCACCAGTACCATTACAG
TATGGTAAGGCGAAGAAAGAGTTCATGGTTCAAAGCCACGATGCATCTTACAAGATCAATAAAGGACAATTCGTAGTTGGATATCAGCCC
ATGGCTAGTAGGGACCCTAAGATTTTCGCAAACCCGGATGAGTTTGTACCTGATAGGTTCATGAATGATGGTGAGAAAATGCTGAAACAT
GTCCTATGGTCTAATGGAAGGGAAACAGAGAGTCCAGCACCAGATAACAAGCAATGTCCAGGCAAAGATTTGGTGCACCTATTGGGTAGG
TTAATATTGGTTGAATTTTTCATCAGATACGATACATTCACCCTGGAAATTACACCTCTATTTCGTGCACCAAATGTTGCGTTCAACACA
TTAACTAAAGCAAGTAAATAGTTTGTTATGTGATCAAACTGTGTGTGCCCGCTCACGTTGCATATTCTCTTATTGATTATTTTATTTTTT
TGGTTGTATTTATTTAGTTTTTGTTGTAAATCTTCTTTATGATTCAAATGAATAAACGTTGATTCTAGATCGGATCAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
des	divinyl ether synthase

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	24
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (32)

Alignment image suppressed for unigene with 32 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 1 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101962	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037) E-class P450 group IV - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	27
2	118907	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037) E-class P450 group IV - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	26
5	129313	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037) E-class P450 group IV - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	26

Preceding Unigenes (1)

Unigene	Build
SGN-U214319	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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