Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U567366 in the current build, Tomato 200607 #2

Unigene SGN-U315426

Unigene Basic Information

Unigene ID:	SGN-U315426
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315426
mRNA sequence:	Length: 2316 bp

>SGN-U315426 Tomato 200607 #1 (23 members)
GTTCTTATCTTCTTTTATGTGGTGTTTGACTGCTCTTTAATGTCTACATTTTAATGTTTTGCTTTGTTTTAGGTTCCTGTTTCCTGGAGG
AAAAAAAGGGATTTGGTTGTTTTTGAGGAACTTTCTATGTTGTTGATGGAGCAGCTTATGTTGGTGTGTTTTTCTAATAAGAAGGGGATT
AATGGCTTAAGCTTGGAGTCCGAGTGATGGGTTTGGTAAGCACAGTGTATTGAGGTATCAATATTCATTTCTATGGCCTCGACACCTTCT
TCCAAGAGTTTAGCCGAAAAGCTGAACAAGACAACTGGAAATCAGACAACAGAACGGAGTTCTCGCAGGTCTACACCTTCCCAAGTTCCA
AAAAATAACAAATTAGAGACCACGATTTCTAAAGAACGAGAAGTTGTATCGAAACAGCTTGTGGTAGAATCAACTGTCACCCAAAAGTCG
CAGAGCAGTCAACCTAAGGGATCTTCCAACTCACTTGCTGATAAATTCGATTCAAACTTATATTTGGGCAATTCTAAGAATTCAGCTAGT
GGAGTAGGTTCTATGCCTACAGAGACAAAAGGCTCACAAGGGACAGCTGATCAGGAAAGAAAGAATTCTACTAAGGACAGCTCAGCATCA
GCCAAAGTTAGTGATGGGGCTAGCAGTATTGCAAAAACAAGTGGAAGTGCCAAAATTAGTGATCGAGCAGATTTTCTTGAGAGTGGTAAG
AGCAGCATCTGTAGGGGGAGCACAGGAACTGACGTAAGTGAGGAGAGTACTTCTAGCAGCTTGAGCAGCAGCGTTAACAAACCCCACAAA
GCTAATGACTCAAGATGGGAAGCCATTCAAGCTATCCGGACTAAAGATGGGGCATTGGATTTGAGGCACTTCCGGTTGCTGAAGAAGTTG
GGAAGTGGTGATATTGGAAGTGTGTATCTGTCTGAGTTGTGTGGAACAAAGTGTTATTTTGCCATGAAAGTTATGGATAAGGCGTCGTTA
GCTAGTCGTAAGAAATTGCTTCGTGCACAGACAGAAAGAGAGATTTTGCAGTCCCTGGACCATCCATTTCTCCCAACATTATATAGCCAT
TTTGAAACAGAAAAGTTCTCATGTCTAGTGATGGAGTTCTGCCCAGGAGGAGACCTGCACACACTCAGACAAAGACAACCAGGGAAGCAT
TTTTCAGAACAAGCGGTGAAATTCTACGTAGCAGAAGTGCTCCTTTCCCTGGAATACCTTCACATGCTTGGCATTGTCTATCGTGATCTC
AAGCCAGAAAATGTGCTTGTCAGAGAAGATGGACATATAATGCTCTCTGATTTTGACCTCTCCCTTCGCTGTGCTGTCAGTCCAACACTA
GTCAAGTCATCATCTCTTGAAGGTGAGCCACTGCGCAAGAATTCAGCTTATTGTGTGCAGCCAGCATGCATCGAGCCCTCTTGTATTCAG
CCATCCTGTGCTGTTACTACTACATGTTTCGGGCCTCGCCTCTTTTCCAGCAAGTCAAAGAAAGAAAAGAAATCTAAAAATGAAATAGGT
AACCAAGTTAGCCCATTACCAGAGCTTATTGCTGAGCCTACTGGAGCACGGTCAATGTCATTTGTCGGGACTCACGAGTACTTAGCACCC
GAGATAATCAAAGGTGAAGGACACGGCAGTGCAGTAGACTGGTGGACCTTTGGTATCTTTCTATATGAGTTACTGTTTGGCAAAACACCC
TTCAAGGGATCAGGAAATCGACAAACTCTTTTCAACGTTGTTGGTCAGCCCTTGCGGTTTCCAGAATCTCCAGTGGTCAGTTTCTCAGCT
AGAGATCTTATCCGAGGCTTGCTCGTGAAGGAGCCTCAGCATAGACTGGCATACAAAAGAGGAGCCACAGAAATCAAGCAACATCCTTTC
TTTGAAGGTGTAAATTGGGCTTTGATACGCTGCGCGAGCCCTCCTGAGATCCCAAGGCCTGTGGAATTCGAGAGAATTTCAGTTCCACCA
GCAGCATCAACCAGTGAGAAAGGTGTAGCTGGAACTGTTCCTTACCAGAAGAATTCAGACAACTATCTTGAGTTTGATTTCTTCTAATCT
ATTTTTTATATATCTTTTTTTCCGTCGAGGCGATATTGGCTGTTCATCTTCACAAATTGAAACATAGGAAGGCTGTACAACATTTGGAAG
ATGTTATGTGAAGGTTTGATTAGTTTGATGATCATATTATTGTTTTGAGTTGTAATTCAACAGTTGAAAATTTGTTGCATGCCAAAACAC
TACAAGTTTGATGCTACCAATCGATAATGTGAATTTGTTAGTTTATTTAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	LC	Leaf Mature leaves	5712	3
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	7
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (23)

Alignment image suppressed for unigene with 23 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 3 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118461	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	115
5	128997	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	72

Preceding Unigenes (1)

Unigene	Build
SGN-U214956	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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