Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U572038 in the current build, Tomato 200607 #2

Unigene SGN-U315460

Unigene Basic Information

Unigene ID:	SGN-U315460
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315460
mRNA sequence:	Length: 1552 bp

>SGN-U315460 Tomato 200607 #1 (25 members)
ATCGGCCGAATTGATAATTCACTCTCTTGTAAAACCAAGAAAATGAATTCTAAAGTATTTTTCCTTTTATCTATTTTAGCTTTGTTGGCT
TTCTCTAAACTTACTTTAGTTTCTTGTAGAAAGGCCAAAACCAACCATGGTTTAGATGGATTCACTCTTGAGCTTATCCATCGCGATTCT
CCTCTCTCTCCCTACTATAACCCTTCCACCACCCCTTCACAACGCCTCCGAGATGCATTCCAAAGATCTTTCTCTCGAGTATCTTTCTAC
ACGAAAGCTTCCATCCATCCCACCACACTCGTCAATCATGCTATTCAATCAGACGTCATTCCAGATTACGCAGATTATTTAATGAAAATT
GCCATTGGTACTCCCCCGAGGAAAACCTATGCCATTCTTGACACTGGGAGTGACTTGACATGGATACAATGCAAGCCATGTAATCGTTGT
TACAAGCAAATATTACCAATCTTCGATCCTAAAAAAAGCTCAACGTATAAAACAATTGGATGTCAAAGTAAGGAATGTAAGTTCGTAAGA
GAGTCAACTTGTGGAAGTAAAAATGTTTGTGAATATGAAGTGCATTATGGTGATGGTTCTTATAGTATTGGTGATGTTGCTTCTGACACA
TTCACATTTGATTCAACTTATTCTAAAAAGGTCAATGATATTTCAATTGAAAATGTTATTTTTGGTTGTGGACATCATAATGGTGGCAAT
TTTGGCAACCATAGTGCTGGGATTGTGGGATTAGGATATTCAAATATCTCGATTATTAATCAACTTGATAAACAAATTAAAGGGAAATTC
TCATATTGTTTAGTCCCAAATGGTGATTTATCACTACCTTATCATTCTCCTAATACTACTAGTAAAATTAATTTTGGTCCTAAGGCATTT
GTATCGGGGACTAACGTTCTTACAACTCCTATAATTCGAAAGAAGTCTGTTGTATTAGGCTACGATCTATTCTACTTTTTAAATCTCGAA
AGTATTAGCGTTGGAGGTAAGAAGTTAGAGTTTAAGTCTTCACAACTCATGAGTTCTTCCGATGTTGCTGATGAAGATTTGGGAAATATT
ATAATTGATTCTGGGACGACATTGACATATCTCCCTGAGAATTTTTACGACAGATTTGAATCAATTTTGGTGGAAACGATTAAAGGATCG
AGGAAAATAGCTCCCCCGGGTGTGGACCTACCCATATGTTATGAGACGAAGAGCGTTGTCGAATTCCCTAACATTGTGTTCCATTTCACG
AATGCTGATGTCGAGACGTTACCTATGAATGCATTTTCAAAAGTTGATGAAGAGTTGACTTGTTTGACAATTGTGAAGGGGGATCTATAT
GGTATTTATGGAAACTTGGCACAGATGAATTTTCTTATTGGATATGATCTTGTAAATCACAAGCTCACTTTTTTGCCTACTGATTGTACC
AAACACTGATAACTTAGGATTATAATATCATATTTTTAATTAATTAAGCACTGCTACGTGATGAANAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	6
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	3
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	6
Solanum lycopersicum	LE12	Fruit 12 days post anthesis	276	1
Solanum lycopersicum	cTSB	seed	1880	2
Solanum lycopersicum	cTSC	seed	2256	7

mRNA member sequences (25)

Alignment image suppressed for unigene with 25 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101417	Peptidase aspartic catalytic	227
2	118448	Peptidase aspartic catalytic Peptidase A1 pepsin - Molecular Function: pepsin A activity (GO:0004194) - Biological Process: proteolysis (GO:0006508)	130
5	129036	Peptidase aspartic catalytic Peptidase A1 pepsin - Molecular Function: pepsin A activity (GO:0004194) - Biological Process: proteolysis (GO:0006508)	54

Preceding Unigenes (1)

Unigene	Build
SGN-U215643	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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