Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U579031 in the current build, Tomato 200607 #2

Unigene SGN-U315465

Unigene Basic Information

Unigene ID:	SGN-U315465
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315465
mRNA sequence:	Length: 1573 bp

>SGN-U315465 Tomato 200607 #1 (10 members)
TTTAGCTAATGGGTCCTTTCTCTCTCTCTCTCCTCTTTCTCTCTCTTAATTCAGCCGACAATTATGAGCTTTGAATCATAAAGTTAAAGA
GTGGACTGAAGAAAAAAAAATACTTCTTCTTCTTCTTTCTACTTTCCCTTTTCTTGTTTTTTTTTTTTCAATTTTTTTTTCTTTGATTAG
GAGCTGGAAAATTATGGCTGATGATAAGGAGATGTCTGCTCCTGTTATGGATGTGAATGGGGGAGTCACGGGTCATATAATTTCCACTAC
CATCGGAGGTAAAAATGGTGAGCCAAAGCAGACAGTCAGCTACATGGCTGAACGTATTGTGGGGACTGGATCATTTGGAGTTGTTTTTCA
GGCAAAATGCCTGGAAAATGGGGAGACAGTTGCGATAAAGAAGGTTTTACAAGATCGTAGATACAAGAATCGTGAACTACAGTTGATGCG
TACTATGGATAACCCAAATGTTGTTTCTTTGAAGCATTGCTTCTATTCGACTACTAGTAAAAATGAGCTTTTTCTCAATTTGGTGATGGA
ATATGTCCCGGAAACCATGTATCGCATGTTGAAGCATTACAGCAATATGAACCAAAGAATGCCACTCATCTATGTTAAGCTTTACACGTA
TCAAGTATTTAGGGGGCTGGCATACATGCACACTGTTGCTGACGTTTGCCACCGAGACTTAAAACCTCAGAATATTTTGGTAGACCCTGT
TACCCATCAAGTGAAAATTTGTGATTTTGGAAGTGCAAAAGTGCTGGTTAAAGGTGAAGCAAACATCTCATACATCTGCTCACGGTTTTA
TCGGGCTCCTGAACTTATATTCGGTGCAACAGAGTATACGACCTCTATTGATATCTGGTCAGCTGGTTGTGTCCTTGCAGAGCTTCTCCT
AGGCCAGCCATTATTTCCAGGAGAAAATGCTGTCGATCAGCTTGTTGAGATAATCAAGGTACTTGGAACACCAACGAGAGAGGAAATTCG
TTGTATGAATCCAAATTACACTGATTTTCGGTTTCCACAAATCAAAGCACACCCTTGGCATAAGGTATTCCACAAACGAATGCCGCCTGA
AGCTATTGACCTTGCTTCACGTCTATTGCAGTACTCACCTAGTCTTCGTTGCAATGCTCTTGAAGCATGTGCGCATCCTTTCTTTGACGA
GCTTCGAGAACCCAATGCACGCCTTCCCCATGGCCGGCAATTGCCGCCTCTTTTCAATTTTAAGCAGGAGTTGGCTGGTGCTTCTCCAGA
CCTCATTAACAGGTTGATACCAGATCATATAAAAAGGCAAATGGGACTGCATCTTTTCACGACCCGTGATGACATGACGTAAAAAGTACA
TGTTTAGCTAAGTATTCGGGTTGATGATGATCTGTATATCAAGAAATCCGAGTTCACATTCTCCCCGACAGGTTCCACCATGACAAGCTG
CATCTCCTTGTCGACGAGAGGACAAAGTAAAGGGTTGTTGCTGTGTATTTCAATCCTTCGTCGTGGTATTGTCTTTTCTCGTTCCACTCT
TCGAGTATCTCTCCGTCCTCTCTTTACGGCCGACTAGCTTAAG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	3
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTSD	seed	1504	1

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118420	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	253
5	129072	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	47

Preceding Unigenes (2)

Unigene	Build
SGN-U214657	Lycopersicon Combined #3
SGN-U232983	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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