Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U565492 and SGN-U565494 in the current build, Tomato 200607 #2

Unigene SGN-U315796

Unigene Basic Information

Unigene ID:	SGN-U315796
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315796
mRNA sequence:	Length: 1387 bp

>SGN-U315796 Tomato 200607 #1 (31 members)
TCCTCCAAAGCAAAGTTGAGTAACTTGACGATGGAGTCAAGCAACCCAAAGGTCATCACATGTAAGGCTGCAGTAGTATGGAAGGAGGGG
GAGATGATGAAGATCGAAGAGATACAAGTGGATCCACCTAAATCAAATGAAGTTCGAATTAAGATGCTCTTTGCCAGTTTGTGCCACACT
GATATTATCGCCTCCAATGGCTATCCCATTCCTTTATTTCCTCGAGTTCTTGGACATGAAGGTGTTGGCATGATAGAAAGTGTAGGAGAA
AATGTGACAAATCTTAAAGGAGGAGATATTGTGATTCCACTTTACTTGGGAGAATGCAAAGAATGCCCAAATTGCATGTCAGGGAAGTCC
AATTTATGTCACAAATATCAGTTGACCCATTCTGGCCTAATGCTGGATGACACATCAAGAATGTCCATTCATGGAGGACAAGTAGTATAC
CAACTTTTTAGTTGCGCTACTTGGTCCGAATATGCAGTTATTAATGTCAACTACGTAATCAAGGTTGATCCTCAGAAGATTCCGCTTCAA
CATGCTAGCTTGCTTTGTTGTGGATTTACAACAGGTTATGGAGCAACATGGAGAGAAGTTCATGTTGAAAAGGGATCAACTGTTGCTGTA
CTAGGTCTTGGTGCTGTTGGACTTGGAGCGATTGAGGGAGCTCGAAGTCAAGGGGCATCAAAAATAATTGGTGTTGATATAAATGAATCG
AAGCGGGGGAAAGGAGAAGTGTTTGGAATGACGGACTTCATTAACCCTAAAGAATCCAAGACATCAGTTTCGGAGATGATAAAAGATGTT
ACTGAAGGCTTAGGTGTTGATTATGTTTTCGAATGTACTGGGATTCCGTCCATGCTTAATGAAGCAATTGAAGCCTCAAAATTGGGAATT
GGGACAATTGTTGTAATTGGTGCAGGACATGGACTTACTAGAGAACTCAACTTAGTTTCCTTATTATGTGGTCGAACATTGAAAGGTTCA
GTATATGGTGGAATAAGACTTCACTCTGATCTTCCTGTTCTACTTCATAGATGCTCAAATAAGGAGATTCAACTAGATGAGCTTATAACT
CATCAAGTTTCGTTGACTGAAATCAGCCAATCATTTGAGTTGTTGAAGATCCACATTGTGTCAAGATTATTATCAAGTTCTAATCACAGC
TTGAAGACTTAAATATCAGAAATAATAATGCAGAGTTAAATTATTTACTCAATTATGAAATTGGCTTAATTTATGCACCATTTGTTGTAG
GTGTATGATGAGCAAATAAACATTGTATTGTTTTGTTTTGTTATAAATAAATGTGTAGGCCATGTGGCTCATACACTATTGCAAAAAAAA
AAAAAAAATACTATTAGAATTGTAGCAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	7
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	17

mRNA member sequences (31)

Alignment image suppressed for unigene with 31 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101421	GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491)	210
2	118545	Alcohol dehydrogenase GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	58
5	129056	Alcohol dehydrogenase GroES-like Alcohol dehydrogenase zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	51

Preceding Unigenes (2)

Unigene	Build
SGN-U215207	Lycopersicon Combined #3
SGN-U215209	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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