Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U574142 in the current build, Tomato 200607 #2

Unigene SGN-U315835

Unigene Basic Information

Unigene ID:	SGN-U315835
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315835
mRNA sequence:	Length: 1335 bp

>SGN-U315835 Tomato 200607 #1 (35 members)
TTCGTCCATCCACCTGTTTCTTGCTATATATATATATACTGTGTGTATATATATATATACTCCATTTACTAAATTTTCATTCTTTTTCGA
ATACCATTTTTTCTCTTTCTCTTTCAAGATTTATTCTTTCTCTTTCCATTATGGGTTTCCCAGCTAATGGTTCATCACAAGAAAAGCCAT
ACAAGTTCTTGATCTATGGCCGAACTGGTTGGATTGGTGGTTTACTCGGTAAGCTCTGTGAAGCTCAAGGAATAGAATACGAATATGGGT
CGGGTCGATTAGAGAATAGGAGCTCGTTAGAGTCCGACCTCGCAACCGTCAACCCGACCCATGTGTTCAACGCCGCCGGAGTGACCGGCC
GGCCAAATGTTGACTGGTGTGAATCCCATAAGGTGGAGACCATCAGAGCTAATGTGGTCGGTACCCTGACGCTTGCTGATGTTTGTAGAG
AGAAAGGATTGATCCTTATCAACTATGCTACTGGGTGTATCTTTGAATACGATTCGGGTCATAAATTAGGGTCGGGTATCGGATTCAAGG
AAGAGGATACTCCGAATTTCATCGGATCTTTCTATTCAAAGACTAAAGCTATGGTGGAGGAACTACTGAAAAACTACGACAACGTCTGTA
CACTACGAGTCAGAATGCCCATCTCTGCAGACTTGACCAACCCTCGAAATTTCATCACCAAGATCACTCGATACGCGAGGGTAGTAAACA
TCCCAAACTCAATGACAATCTTGGATGAACTTCTCCCTATTTCCATCGAGATGGCAAAGAGAAACCTCACTGGCATATGGAACTTCACGA
ATCCTGGAGTGGTTAGCCATAACGAGATCCTGGAGATGTACCGTGACTATATTGACCCAAGCTTCAAGTGGAACAACTTCACAATCGAGG
AGCAATCGGAGGTCATTATCGCTCCACGAAGCAACAATGAGCTCGATGCTTCAAAATTGAGCAAGGAATTCCCTGAAATGAAGTCCATCA
AGGAGTCCCTCATTGAGAATGTCTTCAAGCCAAATAGGAAGACACCAGTAGCTTGAAGATTTAGAGAAAAGATCCAATTTTTACATGATT
TTTCTTTGTCTTGTTCAATGAACCAACTATGTTTTCAGTTCTAATATTTGGGGTTGGCTTTCTCTCTTCTCTCTTCACTATTTCTGATTT
TCGGTATCTTTTTCCTTTATTGTTGTATTTGAGTGTTGTAACGGTATTATTTCATCATGAATAAAATCGAAAAAATGAGTTTCAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (15)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	10
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	3
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	4
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	2

mRNA member sequences (35)

Alignment image suppressed for unigene with 35 aligned sequences.
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Markers Information (0)

Expression Data (4)

Annotations (manual: 0 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101369	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	604
2	118929	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	25
5	129321	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	25

Preceding Unigenes (1)

Unigene	Build
SGN-U215290	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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