Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U564043 and SGN-U564044 in the current build, Tomato 200607 #2

Unigene SGN-U315917

Unigene Basic Information

Unigene ID:	SGN-U315917
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315917
mRNA sequence:	Length: 1242 bp

>SGN-U315917 Tomato 200607 #1 (11 members)
CCAATTTTTCCAACGGATCCGACCCGATTCACCCCTCACATGGCCTTAGTTCGTGATCGCCGACACCTAAATCTCCGTCTTCCCTTACCG
GAACCCTCCGAACGACGTCCTCGTTTCCCCTTACCTCTCCCTCCATCTTCCGTACCCACCGTCAACTCTACCGCCAGCACCACCACTGCT
ACAAATACTACGACGACCACCACTGCTTCTACTACCACTATCTCCATTTCGGAACTTGAAAAGCTTAAGGTTCTCGGTCATGGAAACGGT
GGAACTGTGTATAAAGTCCGTCATAAGCGGACCTCCGCGATCTACGCTCTGAAAGTTGTTCACGGTGATAGTGACCCAGAGATTCGCCGT
CAGATCCTCCGGGATATCGGTATTCTTATGGAGTATATGAACGCCGGTACATTAGAAAATCTACTTAAATCACAATTAACTTTCTCCGAA
CTCTGTTTAGCGAGAATCGCTAAGCAAGTGCTTGGTGGATTAGACTATTTGCATAGTCACAAAATCATTCACAGAGATCTAAAACCTTCG
AACCTTTTAGTGAATCGTGAGATGGAGGTGAAAATCGCTGATTTCGGAGTGAGCAAAATCATGGGAAGGACTTTGGATCCTTGCAATTCA
TACGTTGGAACTTGTGCGTATATGAGCCCAGAAAGATTTGATCCAGACACTTATGGAGGTAACTACAATGGTTACGCAGCTGATATATGG
AGCTTAGGTCTCACTTTAATGGAACTGTATATGGGCCACTTTCCGTTCCTGCCGCCGGGTCAGCGACCGGATTGGGCTACTCTGATGTGC
GCTATATGCTTCGGTGAACCACCAAGTTTGCCGGAAAATACGTCGGAAAAATTCAATGATTTCATGAAGTGTTGCTTACAGAAAGAGTCC
AGTAAGAGATGGAGCGCTCATCAACTTTTGCAACATCCGTTTATACAGAGTATCGATTTGAAATCCACCTAAAAAGGGAAAAAAGCAAGC
TAAAAACTGGAATTGGAATCCGAGTTACTGTAAATAGAACGAGATTCTTCTTCTTTTTTTTTTTGGTTCACTTTTTGTATATTCTTCCAC
TTTGAATCTGAAATCGAAATCAGAATCATCCTCTGTACTGGAAAAAAATGCTCCATTTCCACAGCTAAAATCATCTGTGGAATTTTGGGA
CCTAATGAATTTTAACTTTTCTTCCAGCAACTTAAAAAAAAAAGGCAAAAAAAAATTTTCCTAATTCAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
SlMAPKK4	MAP kinase kinase 4	Mitogen-activated protein kinase

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	7
Solanum lycopersicum	cTOS	suspension cultures	8026	1

mRNA member sequences (11)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (6)

Annotations (manual: 0 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118408	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	587
5	136050		3

Preceding Unigenes (1)

Unigene	Build
SGN-U215082	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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