Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U566691 in the current build, Tomato 200607 #2

Unigene SGN-U315941

Unigene Basic Information

Unigene ID:	SGN-U315941
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315941
mRNA sequence:	Length: 1409 bp

>SGN-U315941 Tomato 200607 #1 (8 members)
GGAACAAAAAAAAAAGAAAACTCTTCCCCTTCCCCTTCCGCATCTTTTCCCTTCCATACTGTCTCCGCAAATGGCCAAAACTCCCAGCGA
CTCCAAACAGCCGGCAGTTTCATCGGCGGAGATGGACGGAGTCGAGAAGGTATTCAGGAAGTTTGACGCCAATGGCGACGGAAAAATCTC
TCTATCGGAGCTTGGCGCGATTCTGAATGCACTTGGCAGTAAGACGTCGCCGGATGAGGTAAATAGAATAATGTTGGAAGTTGATACTGA
TGGGGATGGTTTTATTGACTTGAAAGAGTTTGCTGCTTTTTACTGTCCGCGAGGAGCGGACGGTGATAATAAGGAGCTTCGGGAGGCTTT
CGACTTGTATGATAAGGACAAAAACGGCAAAATCACAGCGGCTGAATTGCATTCTGTTATGAAGAGCCTCGGAGAGAAGTGCTCGCTCAA
GGATTGCCGTCGTATGATCAGCAAGGTGGATGTTGACGGCGATGGATGCGTTAACTTTGAGGAGTTTAAGAAGATGATGAGTAGGACGTG
ACTTTTCGGATCATAACTTATGGAATCAACGGTAGGTTTATTTGCAACCGATTTCGGAACTCTGTAGATACGCTTCTGTTTCTGCCATCG
TTTTTGCTGTCAATCCACTCTAACTGTAGTTAGGTATGAAGAAATTCCGAATCAGCAAAAAACTTTATTATTATCCTATTTGATTTGGGA
TTATGATAATTCAAAAAAGGTAAGAATAATACTTTGCAAAAATAAAAATTAGTCTTAAGACATCTACTATTGAGTCACGCGCAATCCATC
TCTGTTACTGCTCATTTTATCTACTACTTTTATTTGCTTTTTTGGTACTTTTGAGTGCTTTTGAAGAAATGCATTTTCAAAGGTGCTGAT
AGTGCCAAGACCACACGGAATTGTAATCGTGTTAATTGGGCAACGCGCTTGTAGCTTTCATATTGCTAGTGGTAAATATGTACTCCGCCT
ATGTCAGTTTTTATTTTTTCCTCCGAAACGCCGTTTTTCATTTATTAAAGGCGTTTTGCATTTAATACTACTTCCACCTGTTTTTCCACT
TTTCCGTCAATATCTTAATCCATTTCCACGAAAATACTAAGATAGTACTTAATTATTAGGTTGTGGAGTCTGATTAATATATATAGTTAT
TTAAGAAGTTTAACAGGTGAAATTGCCAGGGGTTATGGAGTGTGGGAGCCCCCATCCGAAGGAGGGTTTGGGGCGCTGCCCCGACCTAAA
TTTTAGGCTGTAGTATTTTTTCTCTGTAACCAAAAGTATTCTGATTTATCAATATATATGTAATCAAAAGTATTCTGATTTATCAATATA
TATATTTCATCGCCGGGGAAGTTTACTCACAAATTGTTACCAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (2)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118408	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	587
5	128952	Calcium-binding EF-hand - Molecular Function: calcium ion binding (GO:0005509) EF-Hand type - Molecular Function: calcium ion binding (GO:0005509)	130

Preceding Unigenes (1)

Unigene	Build
SGN-U214766	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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