Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U577160 and SGN-U581075 in the current build, Tomato 200607 #2

Unigene SGN-U316056

Unigene Basic Information

Unigene ID:	SGN-U316056
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316056
mRNA sequence:	Length: 1190 bp

>SGN-U316056 Tomato 200607 #1 (4 members)
CAAATGCACGTTGCAAATATTGCCAGTACGAATTGACCAATTCAAATTAAATAAGCTGAGTACTATTGATACTTGAAAAGGAAACATCAA
TAGTCAGAATTATTTATCTTATTCACGCATGACTCAAACATGTCCTAGACATTTTCTTGATACCAAAAATCACTTCAGCTCCTGGTGTTG
GCGTAATCCTTTGGTTCGTCATCGTCATCCCTGTAGTTCCCTTCTGATGTTTCCTCTCCGAGATGTTCATTTACAGATTGAATTCCCTGA
TCTGCACTAACCTGTTCTTGGCTTCCATTATATGATGCTTCAGATCTCCCACCAAATCCCGTGTTAGCGAAGCTATTATTATTGTTACTA
GGAGCTCCACCAAAGTCATTCCCACTGTTGCCACCACCATAACCACCTGAGAAACTACTGCCTTGACCAGAATAATTGATGTTTGGAGTG
CTGCTTCCGTAGTTGCCACCCTCAACAGGGGAACTGTTGTTCCCATAGCTGCTACTACCACCTCCATAGCTACCGTAGCCTCCAGCAGAA
CTGTGACCACTAGAAAATCCACCACCGTAATTGTTGGTTTGGTAACCTCCAGAACCTGCAAAATTTCTGCCTTCCCCCCCGCCATAGTTA
TAGCCACTACTGCTACCGTAGCCACCTCCTCCAGCAGAATTGTAGCCACCTCCTCCAGGAGAATTGTAGTCGAGTGAGCCTTTCTACAAA
GAAGCTAGAGCCTACACCTGGTGACATGATTCGCAATCCAAAGCTTGTCTTTGAGAAGGCTGAAGAGATGGCCCAGACATTCAGGCAGAG
AATTGCCCAAGCTGAAGCCATGGCCCGTGCAGATATGCTGAGATTCCAGCCTGAGAGTGGATTGACCCTCAACTCTGACGGGATTTTAGG
TCCGCTGACCTCTGAACTACCTGAGGATGGACTGGACTTGAGTGAGATTCCACCAGCTGATGATTTATGAGTTCTAAATTAAAACCCGTC
GTTTGACCCATTTGTTGCATAAGTTGTATAAATAAACATTGTTTGTAGGTTTAGGAACTAAGAATTGTACCCGCAGTCATTCTATTGTAT
TTTATCATATGATCCTCAACTACTTGACTTGCAGTTTTGTTCTAAGAGAAGCAGCGCTAGCATCAGTAACTATCACAGCATGNCTTGGTT
TTTTTTACGAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (4)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (2)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101362	RNA-binding region RNP-1 (RNA recognition motif) - Molecular Function: nucleic acid binding (GO:0003676)	1383
2	118414	Nucleotide-binding alpha-beta plait - Molecular Function: nucleotide binding (GO:0000166) RNA-binding region RNP-1 (RNA recognition motif) - Molecular Function: nucleic acid binding (GO:0003676)	322

Preceding Unigenes (1)

Unigene	Build
SGN-U215932	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Web URL:

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