Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U566676 in the current build, Tomato 200607 #2

Unigene SGN-U316109

Unigene Basic Information

Unigene ID:	SGN-U316109
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316109
mRNA sequence:	Length: 2614 bp

>SGN-U316109 Tomato 200607 #1 (4 members)
GGCCTAAAAGCAACTTCAGTCTGAAAAGGGGGAAGTTGGGGAACTGAATTTGTCCCTATAGTATTTGTATCTGGTCCATTATTTTACCGG
AATATTCCGATCGCCGGACGACAAAAAGCCATCCATTTCCTCCATCTCCGGCAACTGGATGACTTCTAGAAAGAGAATAAACCAAGTAGT
TCAAGCTGCAATTTGTTAAAATCAGAGTTTGGTAGGGTTTATTTTGACTTTGATATTGTTAGGATTCTCCATGGAAGTACCTGTTAGACG
TTCGAATTATGCAATATTACAGCAGCAACCACCATACGATGAGTTTAATTCAGATGAGAAGAGCAAAAGTAGAGGTGATAAGGGATTATA
TTGGGACTTGATTGATCGCCGAAAAGGTACGACGCCGTTTCAGGCCTCGATTGTGTTACCGACGCAGTCAAGTGAAGGTAGCTTTGCTGA
AAGTTCCATTTCTGGAGTTTCATTTGGGTATATGAATGCTTATTCAGATGTTGGAGGTTCGTTGTCGAAAAGTTGGGCTCAACAGACGGA
GGAGAGCTACCAGCTGCAGTTAACGTTAGCTCTGAGGATCTCTACTGAAGCAACCTGCGCTGATGATCCCAATTTATTGGATTATGTGCC
AGATGAATCAGTATCCCATGCTTCAGCTTCATCTGCATCCGTGGAGGCAATGTCTCATAGATTCTGGGTAAATGGGAGCTTATCGTACTT
TGACAAAGTCCCCGATGGATTTTATTTCATTCAAGGGATGGATCCATATATTTGGACAGTCTGCTCAGATCTGCAAGAAAGTGGTCGTAT
CCCATCAATTGAATCCTTGATGGCTGTTGATCCCTCTGTAGTACCATCAGTTGAAGTAATTTTGATTGATCGGCAAAGTGATCCCAGGTT
AAAGGAACTACAAAATCGAATCCATAGCATGTATCGTAGTTGCAACACCACAAAAGAAGTGGTTGATCAGCTTGCAAAGTTGGTTTGCAA
TCACATGGGAGGCGCAGCTTCTGTCGGAGAAGGTGACTTCATTCCTATCTGGAAGGAGTGCTGTAATGACCTGAAGGATTGTCTAGGATG
TTTTGTGTTTCCCATTGGTAGCCTTTCTGTTGGACTTTGTAGACATCGCACGTTGCTGTTTAAAGTTCTGGCGGACATCATTGATTTACC
ATGTCGAATTGCCAGAGGATGTAAATATTGTAAAGAATCCGATGCTTTCTCATGTCTAGTTCGGTTTGGCCTTGACAGGGAATACTTGGT
TGATTTGATTCGGGATCCAGGATGTTTATATGAACCAAATTCATTGCTCAATGGTCCATCTTCCATCTCAATTCCTTCACCATTGCGCCT
TCCGAGATTTGGACAAGTTGAACCTGCCATGGATTTCACGTCATTCGCTAAACAGTATTTTTCGGATTGTCTATCACTTAATCTGGCCTT
TGATGATTCTTCAGCAGGAACTGCAGCTGATGGGGATGCTGGACAAACGGACAGAAGTTCCATGGATAAAAGCAGTGCAGTTCCTAGTTC
AAGCAATCGTGATGAAGTTTCACGGCTACCTTTGCCTTCAATAAATGCATGGAACAAGGGATGTGATAAAGGCTCTCAACTTCCTGCAAA
ATATCATCCTCCAAATATGTCGATCTCAATGAGCCAGGAAAAGGATTTGATTCATTTGAAGAATGTCCCTCCAATTAGGGAGACTTGCTC
CTGCTAAACCAAGCCGAGGACTTGTTCTTGATGTAGAAGATCTGGATATTCCCTGGAATGATCTGGTTCTGAAGGAAAGAATTGGGGCAG
GGTCTTTTGGGACTGTTCACCGTGCTGACTGGAATGGCTCTGATGTTGCTGTGAAAATTCTCATGGAACAGGATTTTCATGCTGAGCGAT
ACAAGGAATTTTTGCAAGAGGTTGCAATTATGAAGCGGTTGCGACATCCAAATATAGTGCTTTTCATGGGTGCTGTTACTGAGCCACCAA
ACTTGTCGATAGTTACAGAATATTTATCAAGAGGTAGCCTATATAGGCTTCTTCATAAACCTGGTGCGAGAGAGGTATTGGATGAAAAAC
GTCGGTTGTGTATGGCTTACGATGTGGCAAAGGGGATGAATTATCTTCATAAACGCAAACCACCTGTTGTTCACAGAGATTTAAAATCTC
CAAATCTTTTAGTGGATACAAAATATACAGTGAAGGTCTGTGATTTTGGTCTTTCTCGATTAAAAGCTAATACATTTTTGTCATCAAAGT
CAGCTGCCGGGACTCCAGAATGGATGGCACCTGAAGTTCTCCGTGATGAGCCGTCAAATGAGAAATCTGATATATACAGCTTTGGTGTCA
TCTTGTGGGAGCTGGCAACGTTGCAACAACCTTGGAGTAATTTGAACCCACCACAGGTAGTAGCAGCTGTTGGCTTTAAGGGTATGAGGC
TTGAAATTCCACGTGACTTGAATCATCCGGTGACAACTATTATTGAAGCTTGCTGGGTGAATGAGCCGTGGAAACGCCCCTCTTTTTCTA
CTATCATGGATATGTTGAAACCGCTCATATAACTCTTGCAACACAACCAGATTGTACAGACATGCAGTTCCTCACGTAAATGCTGTAGTA
AATG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
ctr4	CTR1-like protein kinase-4	ethylene signal transduction

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (4)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118442	Tyrosine protein kinase - Molecular Function: protein-tyrosine kinase activity (GO:0004713) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	149
5	129387	Tyrosine protein kinase - Molecular Function: protein-tyrosine kinase activity (GO:0004713) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	23

Preceding Unigenes (1)

Unigene	Build
SGN-U225473	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Web URL:

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