Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U577157 and SGN-U595588 in the current build, Tomato 200607 #2

Unigene SGN-U316138

Unigene Basic Information

Unigene ID:	SGN-U316138
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316138
mRNA sequence:	Length: 1547 bp

>SGN-U316138 Tomato 200607 #1 (31 members)
TTAGTTACCCCTCATCTCATTTCCCTTTCCTTCTTCTTTCGATTTATTGCTGCAAAAGCGTTTGTATTGCAGAGTTAGGGTTTCACATAT
AACTGTGTGTGTACTCGCCGATTTTGGTTAGTTAGCAGAGCGAACACACCTCAAGTACAAAAAGGGTATCTGGAGTGCATACGACACGAT
TACTGGAAATAAATGGAAGCTCTACTTGTAAGAAAACTGGGCGACCCAACTCTGCCACCAAATGCCTCAGAGAAGTCGTCACTCGATCTC
TCAACATCCCACCCTATACCTAATTTGGAATCGCCAACCTCCGTTAGAGTTCGAATCAAAGCCACCAGCTTGAATTTCGCAAATTATCTC
CAAGTTCTTGGCAAATACCAAGAGAAACCTCCGTTACCCTTCATCCCTGGCTCCGATTACTCTGGCGTTGTTGAAGCCGTTGGCCCTAAT
GTCACTAAGTTCAAAATTGGAGACCTCGTTTGCTCTTTTGTTGCCCTTGGCTCATTCGCTCAATTCATCGTCGCCGATGAATCTGACTTG
TTTCAAGTACCTGATGGGTGTGATCTAGTTGCAGCTGGTGCACTTCCTGTTGCATATGGGACATCACATGTGGCACTGGTGCATAGAGCG
CAGCTGCGTCCCAAACAGGTTTTACTAGTGCTTGGAGCAGCTGGAGGCGTTGGGCTTTCGGCGGTACAAATTGGGAAGGTTTGTGGAGCG
ACAGTTATTGCAGTGGCTAGGGGTAATGAAAAGGTGCAGTTTTTGAAGTCTTTAGGTGTTGATCATGCAGTAGACTTGAGCAGTGCAAAT
GTCATCGAAAGTGTAAAGGGCTTCCTGAAGTCAAGAAAGCTCAAAGGGGTCGATGTCTTGTATGATCCAGTCGGGGGAAAACTTACAAAA
GATAGCTTAAAGCTATTAAATTGGGGGGCACAAATTCTGGTTATTGGATTTGCAAGTGGGGAAGTACCTGTCGTCCCAGCCAACATTGCG
TTGGTGAAGAACTGGACAATTCACGGACTGTATTGGGGAAGCTATAAGATACATCAACCCAATGTGCTTGGAGATTCTCTGAAGGAGCTT
CTAGCTTGGTTGTCTAAGGGTTTGATTACAGTCAACATTTCTCATACATTCAGCCTGACAGAGGCCCATCTTGCTTTTACTGCTCTCAAA
GATAGGAGAGCAATTGGCAAGGTGATGATAACATTTGATGGTGGGAAAATCGTCAAGTCCAAGCTTTAATTGTAGTGATCGACTCGGAAT
GAGACGAGGTGCACAAGATTTTCCTGCTGCGTGACTATTAAGATTATGCACCAGCCATTGGCTTTTTGTCACAAGGAGGTACTGCAATCA
ATAAATATGTGGAGCTTGTATTTTGTATTTATGAAAGAAAGAAATATAAGGTAATAGATGTTATTGCAACGTAAAAATAAATGTACATGA
AAATTTGAGTGGAACAAAGTAAAATTTAGTTTTAGTATTACTTCTTTTATGTTCAAAAATCATTTTCAGAATATAATGTCCTGTCATAGT
TCAAATCAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (16)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	7
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	7
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (31)

Alignment image suppressed for unigene with 31 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (3)

Annotations (manual: 1 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101421	GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491)	210
2	122520	Alcohol dehydrogenase GroES-like Quinone oxidoreductase/zeta-crystallin - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	5
5	132720	Alcohol dehydrogenase GroES-like Quinone oxidoreductase/zeta-crystallin - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	5

Preceding Unigenes (1)

Unigene	Build
SGN-U214816	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
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