Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U576405 in the current build, Tomato 200607 #2

Unigene SGN-U316150

Unigene Basic Information

Unigene ID:	SGN-U316150
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316150
mRNA sequence:	Length: 1983 bp

>SGN-U316150 Tomato 200607 #1 (29 members)
CTAAAAAACACACTCAGTAACAAATAAATCTCATCAATGGCTTTATTTTTAATTATTCTAACTTCAATAGCCCTAATTTTCTTAGCTCAT
AAACTCTACCACCGTCTCCGGTTCAAATTACCACCAGGTCCACGGCCGTTACCGGTGGTCGGAAACCTCTACGACATTAAACCAGTGAGA
TTCCGATGCTTCGCCGATTGGGCCCAAACATACGGCCCGATTTTCTCAGTTTACTTCGGTTCACAGCTGAACGTTGTTGTAACTACAGCT
GAATTAGCGAAACAAGTATTGAAAGAGAATGATCAGAATTTAGCGGATCGATTTAGAACTAGACCTGCTAATAATTTGAGTAGAAATGGG
ATGGATTTGATTTGGGCTGATTACGGTCCTCATTATGTCAAAGTAAGGAAGCTTTGTAATCTCGAACTTTTTACTCCTAAAAGACTTGAA
TCTCTTAGGCCTATTAGAGAAGACGAAGTTACTGCCATGGTGGAAAGTATTTTCAATGACTGTACTAAGCCTGATAACAGGGGTAAAAGC
CTGTTGATGAGAGAGTACTTGGGATCAGTAGCATTCAACAACATTACAAGGCTAACTTTTGGTAAAAGATTCATGAATGCAGCAGGTGAG
ATTGATGAACAAGGCCAAGAATTTAAGGGCATTGTATCTAATGGCATCAAAATCGGTGGAAAACTTCCCTTGGCAGAGTATGTTCCATGG
CTCCGTTGGTTTTTCTCAATGGAAAACGAGGCACTTGTGAAACACTCTGAACGTAGAGACCGGTTAACAAGAATTATCATGGATGAACAC
ACTTTGGCTCGCAAACAAACTGGTGATACTAAGCAGCATTTCGTCGATGCCTTGCTTACTCTTCAGAAGCAGTATGATCTTAGTGATGAC
ACTGTTATCGGCCTCCTATGGGATATGATCACAGCAGGAATGGACACGACAACGATAACAGTAGAATGGGCAATGGCAGAGCTAGTTAGG
AACCCAAGGGTGCAACAAAAGGCTCAAGAGGAACTTGACAGGGTTATTGGATCGGACCGAATCATGTCAGAAACCGATTTCTCTAGACTT
CCTTACCTTCAATGTGTAGCCAAAGAAGCTTTAAGGTTGCACCCTCCAACGCCCCTAATGCTTCCACACAAGGCCAGTGCCGGTGTCAAA
ATCGGCGGTTATGACATTCCCAAGGGAGCCATTGTACACGTGAATGTTTGGGCTGTGGCTCGTGATCCAGCAGTGTGGAAGGACCCGTTG
GAGTTCAGACCAGAACGCTTCCTTGAGGAAGACGTTGACATGAAGGGACACGACTATCGGCTACTACCATTTGGTGCAGGAAGGCGTGTC
TGCCCTGGTGCACAACTTGCTATCAACTTGGTCACTTCTATGTTGGGTCACTTGTTGCATCATTTTACGTGGTCTCCGCCCCCAGGTGTC
AGCCCCAAGGATATCGACTTGACGGAGAACCCCGGAACAGTGACTTACATGAAAAATCCAATACAAGCTATTCCTACTCCAAGATTGCCT
GCACACTTGTATAAACGTGTGCCGATGGATATGTAACAATCTTGTTTACTTCTTTTTGCTACGAGTCTTGAATTTTTCGGTACTTGATGA
GTTTGTTGGGGGCATTTTGGGTATGTAATGTTTGTTTTAAATTCATATCACCAACTTTATATATTATCTTGCAATAATTAGAAGACAATT
AATTGGTGTGGTATTAAGTCCTTTGATCATGCATTTTGTATTAAGGACAAATATCGCCGTGTAAATTGTTCAAATGTTGTATCATCTTTG
TCTGTTCTTTTTTTTTTTCGTTTTTGTTTGTTTATTCCTTTATATTTTGCGTCGCGTCTCTTATACATACCATTTTTCTAGCTTGTTTCA
ACAGAGACTAAGCAAGTAAAAATGTAATCTCATAATAAGCAAATAAATGGCCAAGAATAATAATATATATGACCCAAAAAAAAAAAAAAA
AAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	10
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	4
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	4
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	6

mRNA member sequences (29)

Alignment image suppressed for unigene with 29 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (9)

Annotations (manual: 3 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101365	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	908
2	118409	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	540
5	128928	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	519

Preceding Unigenes (1)

Unigene	Build
SGN-U215381	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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