Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U586105 in the current build, Tomato 200607 #2

Unigene SGN-U316162

Unigene Basic Information

Unigene ID:	SGN-U316162
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316162
mRNA sequence:	Length: 1448 bp

>SGN-U316162 Tomato 200607 #1 (10 members)
GCAAATCATTCGAGAANTTTCAATCATGCGANTAGTTCGACATCCCAACATCGTGGAATCAAGAAAGTTATGGCTACGAACCAAAAAATC
TTGTAGTTTATGGAATATGTTAAAGGGGGTGAGCTTTCGCAAAAGTTGCTAATGGCAAACTTAAGGAAGATGTTGCAAGAAAATACTTTC
AGCAATTGATTAGCGCTGTTGATTTCTGCCATAGTCGCGGTGTATTTCACCGCGATTTGAAACCTGAGAACTTACTCCTTGATGAAAATG
AAAACTTGAAGGTGTCTGATTTTGGGTTATCAGCTTTGTCTGAGCAATTGAGGAGCGATGGTTTGCTTCATACACGGTGTGGAACTCCAG
CTTATGTTGCCCCTGAAGTTTTGAGGAAAAAAGGGTATGATGGTGCTAAATCTGATATTTGGTCTTGTGGGGTTATTTTATATGTTCTTT
TAGCTGGATTTCTACCATTTAAACACGAGAATTTGATGAAGATGTATCGAAAAGTCTTTAAAGGTGAATATGAATTTCCTCCATGGTTTT
CCCCTGAAGCTAAGAAACTGATATCAAAGCTTCTAGTAGCTGATCCAGAAAAAAGAATTACAATTTCAGCTGTAACAAAAGTCCCTTGGT
TTATCAAAGAATTCAATCGATCTTCTTCTTTTTCTTCCATCGAAGAAAACAACACAGATCAGAAACAGGAAACCAAAGAACCAAGTTTGG
GAGCTAGATCAAAATCAGCCCCACCTTTTTACAACGCATTTGAATTCATATCGTCAATGTCTTCAGGTTTCGATTTATCGAGCCTTTTTG
AAGGTAAAAAGAAATCCGGTTCTCTTTTCACATCGAAATGCTCTGCTTCAACGATCATGTCAAAACTCGAATCTTTAGCGAAGAAGGTGA
ATTTTCAGATTGTATCCGCTAAGGAATTCAAGGTGAAGATGCAAGGAACATCGAATGGGCGAAAAGGGAAATTGTCAGTCATGGCTGAAG
TTTTCGAAGTTGCACCACAAGTGGCGATTGTTGAATTCTCAAAATCTGCCGGAGACACCTTAGAATATAAAAAGTTCTGTGAAGAAGATG
TACGGCCTCCCCTTAAAGATATTGTTTGGACATGGCAAGGTGAGAATAATGGCCGTGATTAAACTTTAATTACTGCAGGTAAAATATAAG
CCAGAACCATACTGTTTTTACTTTTATCAGAGTTCTAGCCAATTTTGTTTGATGCTATGGTGAGTTGATATATGTAAATACTCTGTAATT
TCTAATATTTTATGGATATTTTAATCTCACTGAGGTACGTGTAAATTACTCCAGTCCGTTAGCGTAGAGGCGAATTAACAATTTTATATT
AATATAGAGTACCATTTTGTTCAATTTATTGTATGATAGGGATATGTTCTAATTTTATCTAATACTGTATATAAAAAATTGTAGCCGAAA
AAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	5
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTOS	suspension cultures	8026	1

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (4)

Annotations (manual: 0 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118408	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	587
5	128941	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	167

Preceding Unigenes (1)

Unigene	Build
SGN-U214853	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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