Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U577536 and SGN-U592825 in the current build, Tomato 200607 #2

Unigene SGN-U316275

Unigene Basic Information

Unigene ID:	SGN-U316275
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316275
mRNA sequence:	Length: 2300 bp

>SGN-U316275 Tomato 200607 #1 (26 members)
CATTAGCTACGAACAACCATCGATTCCTCCACGAACTTTTCGCTCTGAATGGATACCCAGGGAACAGCCCGGCCTTAATCGTTTATCCAA
ATCTGATGATTCTGCTGCCTCGCAATTCATAATGGCCCATGCATATTCTGAAGGCTCACAACAGATCATAGAATCCGTTAATAAATTGAA
CGATGGGAATGTGGCTCCCCAGACTGAGCATTTTGTACCTTCTGGAAGATCTTTGTCTGCTAATCTACATGCTACTGCAGATAAAGGGGT
AAAACTTCAGGAATCTCAAGAGTTAAGTGTCAGTGCGAGAGAAGTTGATACCAAGGTTGGTGGAGAACTTTCTGAAGCAAATTATAAGCC
TGAGCTGAAACCTGCAACTTATGCAGAGAAAGTGAAATCTGGACTAAGTGATCCTATCTTAAGTAATAATATCCAGTCCGAGTCTGCTTC
CAGGAAGACAGAGCTTCATTGGGGTGATGCATCTTCACATGGAGCCGAGGGAAACAAAGAAGCAGAGCAACTACACTCTTTGGCTGAGAA
AGAGTGTCAGGTTGGAGCAGCAGTTTCCACAGGGATACCCTCTGGTACTGTTGGTACACTTGAGCATGGAAGCATTCTTTTTGACATTAA
TGACTGCTTTCCCCATGATTTTCTCGCTGATATATTTTCCAAAGCCAAGCTTATGGATGCCTCACCAGTACCTGCCCCACTGTACAGTGA
TGGAACTGGTTTGAGCTTGAATATGGAGAACCATGAACCAAAGAACTGGTCCTTTTTCCAAAAGATAGCTCAAGGTGATTTTGATAGAAG
AAATGTCTCTTTGATGGATCAGGATCATCTTTGTGTGTCTTCTACTCGTGCAAATGTTGATGATGGGGTCTCTATGGATTATGGCTATCC
TCCTTTCAAGGGTGATGGACCAATGATAGATCATATGGACTCTCAGCTCAATATTGAAGCTGAATTCCAGCAAGCATCTCCTGAAATTGT
TGTCCCAGACACCATGGATTTGCCTTCCGGGTACAACCCTTCTCAAACCGCTGACGTTCAAAGTATGCAGTATGATGTTGAATTGAGTTC
AAAAGTACCTGAATCGGGTTATCAGGATGAGAACCAAGGAGCTCAGAATGCTGGCTTTCCGCTTACCAATCTCCCGCTTGGAGACTTTGA
TCCCAGCTCTTTGCAGATAATCAGTAATGAAGATCTTGAAGAGTTAAAGGAATTAGGTTCTGGAACATTTGGGACCGTATATCATGGAAA
ATGGAGAGGGACTGACGTTGCCATCAAGAGAATTAAAAAAAGCTGTTTCACAGGTCGGTCATCAGAGCAGGAGAGATTGACTGTGGAGTT
TTGGCGTGAAGCTGAAATTCTTTCAAAACTTCATCATCCCAATGTGGTGGCATTTTATGGTGTAGTGAAAGATGGGCCAGGAGGGACTCT
TGCCACAGTAGCAGAGTTCATGGTGAATGGTTCTCTTAGACATGTTTTACTTTGCAAGGACAGACACCTTGATCGTCGCAAGAGGCTCAT
AATTGCAATGGATGCTGCATTTGGAATGGAATATTTGCACTCGAAGAATATTGTGCATTTTGATCTGAAATGTGACAATTTGCTTGTCAA
CTTAAAGGATCCTTCTCGACCCATTTGTAAGGTGGCTGATTTTGGGCTGTCAAAAATCAAGAGAAATACCTTGGTTACTGGTGGTGTCAG
GGGAACGCTTCCATGGATGGCTCCAGAGCTATTGAATGGTGGAAGTAATAAGGTTTCCGAGAAGGTCGACGTCTTTTCCTTTGGGATTGT
GCTCTGGGAAATCCTCACTGGCGAAGAACCTTATGCAAATATGCATTATGGAGCAATTATAGGTGGTATTGTCAACAACACATTGAGACC
GCCTGTGCCAAGCTTCTGTGACACTGAGTGGAGAATGCTCATGGAACAGTGTTGGGCTCCAGATCCTGCCATCCGCCCATCTTTCACTGA
AATTGCCAGACGGTTACGTACCATGGCTGCTGCCTGTCCAACAAGACCACACGCTCATTCAGCCAAGTGATGGCGTTGTGTCTATCCCTT
CTTTCTTGGTATCTGCATGAAAGTTTCTTTTACAAGTATACTCTGTTTATTCTGTATTATTCAGAGAGAGGAGACTGGTCTCCTTTAGAT
TCTGAAACAACATTATATGGGAAACATGAAAAACTTTTTATATATGTAAAACATCATTTTGTATCTGTGATAGATCGAAATGTAATATTC
TTGGTGATATTAATAATTATAACTATTACCTGTCTTAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (12)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	9
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	5
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1

mRNA member sequences (26)

Alignment image suppressed for unigene with 26 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 2 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	128613		2
5	129501	Tyrosine protein kinase - Molecular Function: protein-tyrosine kinase activity (GO:0004713) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	19

Preceding Unigenes (1)

Unigene	Build
SGN-U215376	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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