Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U585828 and SGN-U594776 in the current build, Tomato 200607 #2

Unigene SGN-U316367

Unigene Basic Information

Unigene ID:	SGN-U316367
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316367
mRNA sequence:	Length: 2831 bp

>SGN-U316367 Tomato 200607 #1 (19 members)
AGATATTCCATCTTCTTTACCTTTTCTCTCTTGTTGGGTGTTTCCAAGATCTGATTTTTACTCAATTTCTCTCTCTAAAAATTGTATCTT
TAGCATAGTTATCAACAGTTTTCAATCTTGACATTGTTGTATGTGCATTTCTAGATCATTGACAACTGTTGTTTGTTTGTAGAGCTTTTT
CTATTAAGTGGAGTACTTTTATTTACAGCTATATCACAAATTTGTTGTCATATAGTGCCACACACAAACTCCTTTTTTCTACTCAATATT
GGATCTTGAAAGCTGTACAAGGTTTTCCCATTCTTTTCCCCTTTCTGTCTGTTCCTGAGATTTGGGGTTTTGACTGCAAAATTGTTGGTG
GGTGTTGTTTGAATCTGATCATTTGTGTTGTGGTTACTTTTGGGTGCTAGGTATAGTTTTTGATCTGCAAGTTGGAATTCAACTTGGTTG
AGTTACTTTTTTGGATAAGATTCTTGACCTTTTTGCTTATTGCTAGCTGTTGTTTGTGGTTTTGATGCTTGCCACCTGAAGTATGCAGCC
TGATCAGCGAAAAAAAGGGTCTGGAGATGTAGATTTCTTTACTGAATACGGTGAAGGGAGTCGATACAAGATAGAGGAAGTTATTGGCAA
AGGTAGCTATGGTGTAGTATGCTCTGCGTATGATACCCATCTAGGGGAAAAAGTTGCAATCAAGAAGATAATGACATCTTTGAACATGTC
TCTGATGCCACACGTATTCTTCGTGAGATCAAGCTTCTTAGGCTTCTTCGGCATCCAGATATAGTGGAAATCAAGCATATATTGTTACCT
CCTTCTCGGAGGGAATTCAAGGATATCTATGTTGTCTTTGAACTCATGGAATCTGATTTGCACCAAGTCATTAAAGCAAATGATGATCTG
ACGCCGGAACATTATCAATTTTTCCTTTATCAGCTTCTTCGAGGGCTGAAATATATACACACAGCCAATGTCTTTCACCGTGACCTGAAA
CCCAAAAATATATTAGCAAATGCTGACTGCAAGCTTAAGATCTGTGACTTTGGTCTTGCAAGAGTGGCCTTCAATGATACTCCAACAGCT
ATATTTTGGACTGATTATGTTGCTACGAGGTGGTATAGGGCTCCTGAATTGTGTGGATCATTTTTCTCTAAGTATACACCAGCAATTGAT
ATATGGAGCATTGGATGTATATTTGCAGAACTACTGACTGGGAAGCCTCTCTTTCCAGGTAAAAATGTGGTTCACCAATTAGACTTGATG
ACCGATCTGTTGGGCACACCCTCCCCAGAATCCATTGCCAGGATAAGAAATGAAAAGGCTCGGAGGTATTTGAGCAGTATGCGTAAGAAA
AAGCCTGTACCTTTCTCCCATAAATTTCCACATGCAGATCCCCTTGCACTTCGTTTGCTAGAAAGGATGCTTGCTTTTGATCCCAAGGAT
CGTCCTAATGCAGAAGAGGCTCTTGCAGATCCATATTTCAGGAATCTAGCCAAAGTGGAAAGAGAACCCTCTGCTCAACCAGTTACAAAA
ATGGAATTTGAGTTTGAAAGGCGAAGGATAACAAAGGAGGATGTGAGGGAGCTGATATACAGAGAAATTCTTGAATACCACCCAAAAATG
TTGAAGGAGTTCTTAGAGGGGCAAGAACCTACAGGTTTCATGTACCCAAGTGCCGTTGACAAATTCAAGAAGCAGTTTGCATATCTTGAA
GAGCATTATGGCAAAGGAGGCGCTGCTGCTCCACCTGAGAGGCAGCACTCATCATCTCTACCTAGGGCTTGTGTATTATACTCAGACAAT
TCAGTGCAAAATCCACTTGAAGTTGCAAATGATCTTTCTAAGTGCTCCATCAAAGAAGATGAGAAACCACAAGCGGACCGGAGTTCAATG
ATCCCCATGACAAGGCTGCCTCTCCAAGTTCCTCAGAATGTTCAAGGTGGTGCTGCAAGACCTGGGAGGGTGGTCAGCTCAGTGTTGCGC
TACAACAACTGTGGAGCAGCAGCTACAGCAGCAGAAGTCATTGAACAGCGAAGAATTGCAAGGAACCCTGGCGGTCCAACTCAATATCCC
ATTTCCAATACTTCATACCCTAGAAGACATCCCAGCTGTAAAAATGAAAGGGGTGAAGATAGTACTGAAGTTTCAAATGGGGTGCAGCCT
AAACCTGAACAGTACATAGCAAGAAAAGTAGCTGCAGCACCAGGTGGACCTGGTAATCAATGGTATTAATTTTGGAATCTCTGATCAGCC
ATGTTACACAGCGAGAAAAGTAGCTGAAGGATGGTTCTCATAAAACACACCATATGCAAGCTAATTTGACTGTCAACCGTAATTTTCTCA
CACAATGCCAAGTTCAGGATTGCTTGGTTATTGACACGGGCACATGAACTTGAAGAATCCCAGTGTGATTTTGGTTGGTTTTGTTCAGAC
ATCTATGTACAACTCGTTACTTATATTTGTCCTCTGAAGTTTAAAAGGTTCGGCATGGATTCTCCTCCATGGGCAACTCTTGTTCTGTGA
TCTGGATAGAAATGGAAGCAAGTGCGATAAAGATGGATGTTGGTAGCTGATTACATGAATTACTACTGATATCAGTTCACCCCTACATGT
TTGTTCTTTTCCCCTCTCCCTTCATTCTTTGCAGAATAACTGTAGAGGCTTTATACTTTTGTTAATGACTCAGACATTGATGATCTTAAC
GTGTAACCTATGACATTCTTTATTAAATAAGGACCTCAATGTTTCTGATGTTCCTGCACTCTGTAAAGCAGAAGAGGGACATGAAACTTT
TGCTTGACGAAAAAAAAAAAAAAAAAACTCGAGGGGGGCCC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (12)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	4
Solanum lycopersicum	vSlycmRNA		8362	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (19)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (3)

Annotations (manual: 1 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118420	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	253
5	128957	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	116

Preceding Unigenes (2)

Unigene	Build
SGN-U215664	Lycopersicon Combined #3
SGN-U215665	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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