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This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U567168 and SGN-U567170 in the current build, Tomato 200607 #2

Unigene SGN-U316379

Unigene Basic Information

Unigene ID:	SGN-U316379
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316379
mRNA sequence:	Length: 2772 bp

>SGN-U316379 Tomato 200607 #1 (26 members)
TGAAAATTTCACAAACTTCATTTTATTGTATCAAAAGGGGCTTAGTTTATCAGTAAGTTTTTATCTGATAAACTAACCAGCATTGCCCAT
TTTTTCTCTTACTTGTAGTTACTTGTATACAAAAACAACAGATCTGCACAGTGAAGTAATTTTTACCCACAAAAAAATGAAGGGTTTTGT
TGGTTCTCTGGTTTTTGTGATTCTTCTTGTTGTTCCAGTAGCATTAGCTGGGCATAATTATGGTGAAGCTTTGAGTAAGAGCTTTTTATT
TTACGAAGCTCAGAGATCTGGGTACCTTCCTCGTAACCAGAGAGTTCAATGGAGGGGTAATTCTGGACTTAATGATGGAAAAGCTAGTGG
GATTGATTTGGTTGGAGGGTATTACGATGCTGGTGATAATGTGAAATTTGGTTTGCCCATGGCATTTACTGTTACAATGTTGTCATGGAG
TATTTTGGAATATGGTAGACAAATGGCTGCTAGCGGTGAACTTAGCCATGCTATGGATGCTGTTAAGTGGGGTACTGATTATCTACTCAA
AGCTCATCCCGAACCTTATGTTCTTTACGGAGAGGTTGGTGATGGTAATACAGACCATTACTGTTGGCAAAGACCAGAAGATATGACTAC
ATCAAGAGCTGCTTATCGAATCGACCCGAACCATCCCGGGTCGGATCTTGCCGGAGAAACAGCCGCCGCCATGGCGGCTGCTTCCATCGT
CTTCCGTCGTTACAACCCGGGATATTCTAATGAGCTCCTTAATCATGCACATCAGCTGTTCGAGTTTGCTGATAAGTATAGGGGCAAATA
TGATAGCAGTATTACTGTCGCCCAGAAGTACTACCGATCTGTCAGTGGATACGCGGATGAATTACTATGGGGAGCTGCATGGTTATACAA
GGCATCAAACAATCAATTTTACTTGAATTATTTGGGAAGAAATGGTGATGCTCTTGGTGGAACTGGTTGGTCTATGACTGAATTTGGTTG
GGATGTCAAGTATGCTGGTGTCCAAACACTTGTTGCTCAGTTCTTGATGTCTGGTAAGGCTGGTCATAATGCACCTGTATTTGAGAAGTA
CCAGCAGAAAGCAGAGAACTTTATGTGTTCAATGCTTGGAAAGGGTAATAGAAATACCCAGAAAACTCCTGGAGGTCTCATCTATAGGCA
AAGATGGAACAATATGCAGTTTGTTACTAGTGCTGCATTCCTTGCCACTACTTATTCTGACTATTTGGCTTCTGCTGGCAAATATCTCAA
GTGTTCTTCCGGTTTTGTTTCTCCGAATGAGCTCCTCTCATTCGCTAAGTCACAGGTGGACTACATTCTTGGTGACAATCCGAGAGCAAC
AAGTTACATGGTGGGATATGGAAACAATTACCCGAGACAAGTACACCACAGAGCTTCTTCCATTGTCTCGTTTAAGGTTAATCCTAGTTT
TGTTAGCTGTCGGGGAGGCTATGCTACCTGGTATAGTAGAAAGGCGAGCGATCCTAATCTCCTTACTGGTGCTCTTGTTGGTGGACCTGA
TGCCTATGACAACTTTGCTGATCAAAGAGATAACTATGAGCAAACTGAGCCTGCCACTTACAACAATGCTCCGTTGATCGGAGTGTTAGC
AAGACTTCATGCTGGTCACAGCGGTTACAATCAGCTCCTTCCAGTTGTTCCTGACCCGAAGCCAACGCCAAAGCCAGCTCCAAGAACTAA
AGTAACTCCAGCTCCAAGGCCAAGAGTACTTCCAGTCCCAGCTAATGCTCATGTTACTATTCAACAAAGGGCAACTAGTTCATGGGCTCT
GAATGGGAAGACTTACTACAGATACTCAGCAGTTGTAACCAACAAGTCCGGAAAGACGGTTAAGAACTTGAAACTCTCCATAGTCAAGCT
CTATGGTCCTCTCTGGGGTCTAACAAAGTACGGTAACTCGTTCATCTTCCCAGCTTGGCTCAACTCTTTACCAGCTGGTAAAAGCCTAGA
GTTTGTGTACATTCACACTGCTTCACCTGCAATCGTCTCCGTTTCAAGCTACACTCTAGTCTAAAAGACATCAACAAGTTGAAAAAGAAA
AAAATGAAGTGGAAATGAAATGCTCACACATTTTTCTTGTGGTTCTAATGTAAGAATTGTGCAGCTATACTACTACTACTACTAGTACTA
ATCGGCGGGGTCAAGCAAGTCCCTTTCATCGTTTCTTTTTCGTTTGTCTGTAAGTTTTCAACGTCTTGTTGGTTTGATTTTGGTTAAGAC
TTTTGATAACGAGGTGTTAGGTTGATAATGTGGAGAAGTCGGAGGAAGAAAGGAGTGAAGAGACGAGTTTATACAAGTGCTCATCCTCTT
TCTCCTCCACTTTATATATATACACATAGTGTTTCAGAAACAGAGAAAAAGAGTGAAAGGAGTAGTTGTAAAGCAAAGAAAGTTTTGCTT
TTGACTTCTCTCTATATTTATTATCAATCTATAACTCTTCATTCTCCTTTGTAATTTCAATGCAAGCTTGAAAATATTCCTAATTAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTGGGGGG
GGGGGGCCGGGCCCCCTTTTCCCCCTAAGGGGGGGGATTTTAAATTCCGGGGGCCGTTTTTTAAAAAAGGGGGGGGGGGAAAAACCCGGG
GTTTCCCCATTTTATTCCCTTGGAACCAATCCCCCTTTTCCCGAGTGGGGTTATAAAAAAAAAGGCCCCCCC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
cel8	endo-beta-1,4-D-glucanase (Cel8)

Genomic locations (0)

None

Library representation (17)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	4
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	2
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum lycopersicum	cTSB	seed	1880	2
Solanum lycopersicum	cTSD	seed	1504	2
Solanum lycopersicum	vSlycmRNA		8362	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (26)

Alignment image suppressed for unigene with 26 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 1 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101447	Six-hairpin glycosidase Glycoside hydrolase family 9 - Molecular Function: hydrolase activity hydrolyzing O-glycosyl compounds (GO:0004553) - Biological Process: carbohydrate metabolism (GO:0005975)	149
2	118491	Six-hairpin glycosidase Glycoside hydrolase family 9 - Molecular Function: hydrolase activity hydrolyzing O-glycosyl compounds (GO:0004553) - Biological Process: carbohydrate metabolism (GO:0005975)	84
5	129031	Glycoside transferase six-hairpin subgroup Six-hairpin glycosidase Glycoside hydrolase family 9 - Molecular Function: hydrolase activity hydrolyzing O-glycosyl compounds (GO:0004553) - Biological Process: carbohydrate metabolism (GO:0005975)	57

Preceding Unigenes (2)

Unigene	Build
SGN-U218121	Lycopersicon Combined #3
SGN-U220961	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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