Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U576934 and SGN-U576935 in the current build, Tomato 200607 #2

Unigene SGN-U316511

Unigene Basic Information

Unigene ID:	SGN-U316511
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316511
mRNA sequence:	Length: 1194 bp

>SGN-U316511 Tomato 200607 #1 (12 members)
CGGGGAATTTTTTTTCTCCCTTTATAGATTACTTACAGTAAAAATAGCGCGTAAATATTTTTGGGAAGGAGTATATCTCAATTTGACATC
TCATACACGTACAAACGTAACCCACCAACCAACCGACGCTCCATTATTTTGAGAAGAAGCCTTTCTTCTTCATCATCAATTTTCAGCTCA
TTCCTCTGCACCTTCCTTTTTTTTTTGTATTGTAATATACACATATTGCGTTTTATTTTTGTTGATTAGATATTGATATTCAGAGATCGA
ATTGCTCTGCTATTGTAATTTTTTTTTGAAAAAAATATGGATGAATTTGGCGTTTTGGTTGAGAGATATGGCGTCAAAGTTCAAGGAGGC
AAGTCAACGCCCATGGCTAATTTGAAGGCGAAAAACAATTCCAGCAATGGTTTTCCGTCGAATCTCGGGTTTAATTCGGGTCAAAACACC
GGGTATAGCTCTGGGGATCCATTTGCGGATGATCTCGATGGAATTTTCAGGTCTAAGACTTCGCCGAACTACGATGATAATGATATTTTT
GGAGGTGTGTTTGCAAATTCAAAGCAGCAGCAGAATAATGTGGATATTGAATCAGTATTGGGAGGTTCGAGTTCGGGTAATAATAATAAC
TATGCTAGTAAGAATGTGAATGATGATTTTGATTTGTTTGGTACGGAACCAAAGAGGAGTGACTCGATTGATGATATATTTGGGAATTTG
GGATTGAAGTCGGATAGTTTGAAGAAAGATCCTGCTGTAAATAGGTCAGAAGGTGATGATTTGATTCCTGGATTTGGTGATTTTAGCTCC
CCAAGTTACAGCAAAAAATCAGACCCGAGAAGTCCTCAGCAATCAAATTCTTCTAAATCAAGCTCCTCTTCACCAGATGATCCATTTTTG
GTTTTTGAATCATCTACCAGTGAGGCAAATGCTTCTTCTTGGCCATTTTCAGAATCGTCGGAACAGCATCGTGGAAGTAATCCCGTGACA
TCTTCAATTGACGAGCTTGAAAATTTTGCCAATTTTAAGGTTAGGAGTGATACAACCGAACGACCACATGTTCCTAAAAAGGACTCCTCT
GTAAAGAGTCCTGTGGACAGAGCACAAGAGAAGTCCAAAAATGTGAGGGTGACAATCAACAAACCAAGCAATACGACAAAGCCAAAATCT
GCAGCTGAGGGACATATGTCTGCA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	4
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	3
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (12)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101392	Peptidase C48 SUMO/Sentrin/Ubl1 - Biological Process: proteolysis (GO:0006508) - Molecular Function: cysteine-type peptidase activity (GO:0008234)	341
2	118824	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	28
5	134208		4

Preceding Unigenes (1)

Unigene	Build
SGN-U218408	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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