Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U576603 in the current build, Tomato 200607 #2

Unigene SGN-U316697

Unigene Basic Information

Unigene ID:	SGN-U316697
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316697
mRNA sequence:	Length: 1321 bp

>SGN-U316697 Tomato 200607 #1 (6 members)
TGGCTGGAATGGATAATATTCCGGCGACGTTAAGCCATGGTGGCAGGTTCATTCAATACAATATTTTTGGTAATATTTTTGAAGTTACTG
CTAAGTATAAACCTCCTATAATGCCAATTGGTAAAGGTGCTTATGGAATCGTTTGTTCTGCTTTGAATTCGGAGACAAATGAATCTGTAG
CAATTAAGAAAATTGCTAATGCTTTTGATAACAAGATTGATGCTAAGAGGACTTTGAGAGAGATCAAGCTTCTTCGACATATGGATCATG
AAAATATTGTTGCGATCAGAGATATAATTCCACCACCACAGAGAGAAGCCTTTAACGATGTTTACATTGCGTATGAGCTTATGGATACTG
ATCTCCATCAAATTATTCGCTCGAATCAGGGTTTATCTGAGGAGCACTGCCAGTATTTCTTGTATCAGATCCTCCGTGGGTTGAAATACA
TACATTCTGCAAATGTTTTGCACAGAGACTTAAAGCCTAGCAATCTTCTCTTGAATGCCAACTGTGATTTGAAGATATGTGATTTTGGGC
TAGCTCGTGTCACTTCTGAAACTGACTTTATGACCGAATATGTTGTGACAAGATGGTATCGTCCACCTGAGCTGTTGTTGAATTCATCCG
ACTATACTGCAGCAATTGATGTATGGTCAGTGGGTTGCATCTTCATGGAGTTGATGGACAGAAAACCCCTCTTCCCTGGCAGAGATCATG
TACACCAGCTGCGTCTTATTATGGAGTTGATTGGCACTCCTTCAGAGGCTGAAATGGAATTTTTAAATGAGAATGCAAAACGCTATATCC
GACAACTTCCTCTTTACCGTCGACAATCATTTACTGAAAAGTTCCCGCATGTAAACCCAGCTGCTATTGATCTTGTCGAGAAAATGTTGA
CATTTGATCCCAGAAGGAGAATAACAGTTGAAGACGCTCTTGCACATCCTTACCTAACATCGCTCCATGATATCAGTGACGAGCCCATTT
GCATGACTCCTTTTAGCTTCGACTTTGAGCAGCATGCGCTTACAGAGGAACAGATGAAGGAGCTAATTTACAGGGAGTCGATTGCATTTA
ATCCTGAATACCAGCGCATGTGAATAATTGCTGACAGATTGTTGCAGGTTTGATCTACATGTTATGTGTAACTGACAATATATCTCCCCA
TGTATATATGTGTGCATTCCGTCCGGGAACATGGATGAGTTTCTTATGCAAACACTTAGTTATGAAGCTGACTTATGTATGGAGAGTTGT
TTGATGTATCTTTATGGGGTGGATTTTATTTTAGACTGAAATGAAAAATTCTGGTGGACAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
mpk1	mitogen-activated protein kinase 1	protein kinase

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	vSlycmRNA		8362	3

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (1)

Expression Data (1)

Annotations (manual: 1 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118420	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	253
5	128957	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	116

Preceding Unigenes (1)

Unigene	Build
SGN-U216184	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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