Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U585847 in the current build, Tomato 200607 #2

Unigene SGN-U316885

Unigene Basic Information

Unigene ID:	SGN-U316885
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316885
mRNA sequence:	Length: 1483 bp

>SGN-U316885 Tomato 200607 #1 (5 members)
CTGATGGAGAAAGATTGCCTTTGGCGGTCAAGGAATTGGGAACTTGTGACCTATACCCACAAAGCTTAAAGCATAACCCCAATGGAAGGT
TTGTTGTTGTTTGTGGAGACGGTGAGTATATCATATATACTGCTCTGGCCTGGAGAAATAGGTCATTTGGCTCAGCTCTGGAATTTGTTT
GGTCGTCTGATGGAGAGTATGCTATCCGAGAAAGTACTTCAAGGATTAAGATTTTCAGCAAAAATTTCCAGGAAAAAAAGAGTATCCGCC
CGACTTTCTCTGCTGAGCACATCTATGGGGGTACCTTATTGGCAATGTGCTCAAATGATTTCATTTGCTTTTACGATTGGATTGAGTGCA
GGTTGATACGACGTATTGATGTTAATGTCAAAAACCTCTACTGGGCTGACAGTGGTGATCTGGTGGCTATTGCTAGTGATACTTCATTCT
ACATACTGAAGTATAATCGTGATGTTGTCTCTGCACATTTAGATAGTGGAAGATCTGTAGATGAACAAGGTGTTGAAGATGCTTTTGAAC
TTCTTTATGAGATAAATGAACGTGTCAGAACTGGAATTTGGGTAGGAGATTGTTTCATTTACAACAATTCTTCTTCGAGACTGAATTACT
GTGTAGGCGGCGAGGTGACCACAATGTTTCACTTAGACCGACCCATGTACCTGCTGGGATATCTCGCTAATCAAAGTAGAGTTTTCCTGA
TTGACAAAGAGTTCAATGTCGTGGGATATACTCTTCTGCTCAGCTTGATAGAGTACAAGACACTTGTGATGCGTGGTGACTGGGACAGAG
CTAATGCAGTCTTACCATCAATTCCTAAGGATCACCATAACAGTGTTGCTCGTTTCTTGGAATCACGGGGTATGATTGAGGAAGCATTGG
AAGTTGCAACAGACGCTGACTACAGATTTGAACTTGCCATACAGTTGGGTAAATTAGAAATTGCAAAGGAAATCGCTGTAGTAGCACAGA
GTGAATCCAAATGGAAGCAGTTGGGTGAACTGGCAATGTCTGCTGGAATGCTGGAGATGGCAGAGGATTGTTTGAAATACGCTAATGACT
TGAGTGGTTTGCTGATGCTTTATTCCTCGTTAGGAGATGCTGAAGGAATGGCTGAATTAGCATCTCTTGCAAAAGAGCATGGAAGAAACA
ATGTTGCATTCCTTTGCCTGTTCCTCCTGGGTAAAGTGGAAGATTGTGTTCAGCTGTTGGTTGACAGCAACCGGATACCTGAGGCTGCAT
TTATGGCAAGATCTTACCTTCCAAGTAAGGTTTCTGAAATAGTTGCAATGTGGAGGAAGGATCTTAATAAGGTTAACCAGAAAGCAGCAG
AAGCTTTGGCTGATCCTGAAGAATATCCCAACATGTTTGAGCACTGGCAAATTGCACATGCAGTTGAAGCTAGAGTCGCAGAGGAAAGGG
GTGTATACCCACCAGCAGCAGATTATGGAAATTATGCTGATAG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101368	WD-40 repeat	806
2	118927	Coatomer WD associated region - Biological Process: intracellular protein transport (GO:0006886) - Molecular Function: protein transporter activity (GO:0008565) WD-40 repeat	25
5	129320	Coatomer WD associated region - Biological Process: intracellular protein transport (GO:0006886) - Molecular Function: protein transporter activity (GO:0008565) WD-40 repeat	25

Preceding Unigenes (2)

Unigene	Build
SGN-U225924	Lycopersicon Combined #3
SGN-U234390	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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