Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U585849 in the current build, Tomato 200607 #2

Unigene SGN-U316886

Unigene Basic Information

Unigene ID:	SGN-U316886
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316886
mRNA sequence:	Length: 1314 bp

>SGN-U316886 Tomato 200607 #1 (7 members)
TGTTTCACCTTGATCGTCCCATGTACCTACTGGGATATCTTGCTAATCAGAGCAGGGTTTTCCTGATTGACAAGGAGTTTAATGTTGTGG
GATATACTTTACTCCTTGGCTTGATTGAGTACAAGACACTTGTGATGCGTGGTGACTGGGACAGAGCAAATGAGGTCTTACCATCAATTC
CTAAGGAGCATCACAACAGTGTTGCTCATTTCTTGGAATCACGTGGAATGATAGAGGAAGCATTAGAAGTTGCTACAGACCCTGACTACA
GATTTGAACTAGCTATACAGCTGGGTAAATTAGAGATCGCAAAGGAAATTGCGGCAGTGGCACAGAGTGAGTCCAAATGGAAGCAGTTGG
GTGACCTAGCCATGTCTAGTGGAAAGCTTGAGATGGCAGAGGAGTGTTTGAAGCATGCAAATGACTTGAGTGGTTTGTTGCTACTCTATT
CTTCTCTTGGAGATGCTGAAGGAATAACTCTACTAGCTTCTCTTGCAAAAGAGCACGGGAAAAACAATGTTGCATTCCTTTGCATGTTCA
TGTTGGGTAAAGTGGAGGAGTGCATTCAGCTGTTGATTGACAGCAATCGGATACCTGAGGCTGCATTTATGGCAAGATCTTATTTGCCTA
GTAAGGTTCCTGAAATAGTTTCAATTTGGAGAAAGGACCTCAGTAAGGTTAACCAGAAAGCAGCAGAAGCTTTAGCTGACCCTGAAGAAT
ATCCTAACCTGTTTGAGCACTGGCAAATTGCACACGCTGTTGAAGCTAGAGTTGCGGAGGAAAGGGGTGTCTATCCACCAGCGGCTGATT
ATGGAAATTGTGCTGATAGACCAACTACTAACCTTGTAGAAGCTTTCAGCAACTTGAGAATGGATGAAGAACCACATGAAAACGGAGAGT
TGGATCATGAGGATGCAGAACTGAATGGTGATGAGGTGCTAGAACGGGGTGAAGATGACCTTCAACAAGAGGGCCAAGAAGAACGGGGTG
AAGATGACCTTCAACAAGAGGGCCAAGAAGAAGCTGTTGTGGTGGATGCTGACTCTACTGATGGAGCAGTACTCGTTAATGGAAATGAGG
GTGATGAAGAGTATGGTACGAATACTGAAGGAAAACCGTCAGCCTAAAAGCAATTGGTTGGTTCTTACACCACATCATTAGGTTCAGCCA
AGACAGATGGTTCCAGTTGTATGTAATCCGTCCTTAAGATTCTGCTGCCTTAGAAGGACAGTTCAAGGGACCGCATGTCTGTTCAGCCAG
TGTTGTGATTTTGTAGCAATGAGTTTTGTCAGGATGCTGTAGAATGACATTTGT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	1

mRNA member sequences (7)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101368	WD-40 repeat	806
2	118927	Coatomer WD associated region - Biological Process: intracellular protein transport (GO:0006886) - Molecular Function: protein transporter activity (GO:0008565) WD-40 repeat	25
5	129320	Coatomer WD associated region - Biological Process: intracellular protein transport (GO:0006886) - Molecular Function: protein transporter activity (GO:0008565) WD-40 repeat	25

Preceding Unigenes (1)

Unigene	Build
SGN-U220724	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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