Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U575910 in the current build, Tomato 200607 #2

Unigene SGN-U316961

Unigene Basic Information

Unigene ID:	SGN-U316961
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316961
mRNA sequence:	Length: 966 bp

>SGN-U316961 Tomato 200607 #1 (5 members)
GGCGAATTGGCGGCCAATCGGCCGAATTGAAGTCAGAGAAGTAGCGATTAAAAAAAACAAAACATACGGAATGAGTGAGTCACTGAAGCG
AAATTATTGTGTGGGTGGAGAGTTAGGAAGGGGACGATTCGGCACCGTTTTCAAGTGTTACTCGTCGGCGACCGGTGAGCTATTCGCCGT
CAAGTCTATCGACAAGCGCCTAATCGCCGATGACGCCATAGATCGACAATGTCTTTACAACGAAGCGAAAATTATGCACTTGCTTTCGCC
AAATCCTAATGTTGTTCGTGTTTTCGATATCTACGAGGACGATACTCACCTTGATATGGTTTTAGAGCTCTGCAACTCCGGCGATTTGTT
CCAACGCCTCAGTAGTCAACCGATTTTCTCAGAGTCCGACGCTGTTGATGTCATGGTACTCTTCCAGATCACCAAAATCTCACTCGTTGC
TGATCAAAATGGGGAAATTTTACTTTTGCTTCGTAAAATGGCTTGAATCAGGAACGATCTACGATGCAGCACGTTGTTGAATTTTCGAAA
ATTGGAGGAGAAAGTAAATTGTAAAGCTAAGCGAAGTAGAATTCATAATCGGCTTTTATTTTAGTTTTTCGTCATTTCTGATAAATTTTA
TGCTTAATGTTTTTATAGGTACCACTAATGAAAGCAATAGCGCACTGTCACCGTCTCGGTGTAGCCCACAGGGACATCAAACCGGATAAC
ATTTTATTCACCGACTCTAACGAACTGAAATTGGCTGATTTTGGATCGGCGGAGTGTTTCCATGAGGGCCAGCTGATGAGCGGCGTGGTT
GGAACGCCGTATTATGTGGCGCCAGAGGTTTTAGCTGGGAGAAACTACAGTGAGAAGATCGATATTTGGAGTGCTGGTGTTATTCTGTAT
ATAATGCTTGCCGGAGTTCCACCTTTCTTTGGTGACTCAGCTTCAGAGATCTTCGAGGCTGTGCTC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
ppck2	phosphoenolpyruvate carboxylase kinase 2	phosphoenolpyruvate carboxylase kinase

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118408	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	587
5	128946	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	159

Preceding Unigenes (1)

Unigene	Build
SGN-U216433	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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