Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U576773 in the current build, Tomato 200607 #2

Unigene SGN-U317199

Unigene Basic Information

Unigene ID:	SGN-U317199
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	317199
mRNA sequence:	Length: 1451 bp

>SGN-U317199 Tomato 200607 #1 (19 members)
CAAGTAGTGCCTAGGCAATTTATGGATCTTGGCTTAGCTGCTGGTGCTGGTGGTACTGCTTCTGAAGCGGAAGAGGCTTCCCTGTCTTCG
TCAGAGGGGCCAAGTGGCAGGGAAAAATCGCGATCACCAGTGAATAACATTGAATCTAGTTCCACATGTGGGATTGTAAGAGAAGATAGT
CCTGAAAAAGTGTCACCTGGTTGGGGTCCTAATAAAATTCCAAGACTTGGTAATACCTCTACTAATAATAAACCTGCTGATCAAGCTACT
GAGGCTACTATGAGAAAGGCTCGGGTCTCGGTCAGGGCTCGATCAGAAGCTCCCATGATCACAGATGGCTGTCAATGGCGAAAGTATGGG
CAGAAAATGGCTAAGGGAAACCCGTGCCCTCGAGCTTATTACCGGTGCACCATGGCAGCTGGTTGTCCAGTTCGGAAGCAAGTTCAAAGA
TGTGCAGAGGACAGAACAATCTTGATCACAACTTATGAAGGTACTCACAACCATCCGTTGCCTCCGGCAGCCATAGCGATGGCCTCGACA
ACTTCCTCAGCAGCGAAAATGTTGCTCTCGGGCTCTATGCCAAGTGCAGATGGGCTAATGAATTCCAATTTCTTCGCGAGAACTCTCCTT
CCTTGCTCTTCCAGCATGGCCACAATTTCAGCCTCGGCCCCGTTCCCTACTGTTACATTGGACCTAACTCAATCCCCGAACCCGTTGCAA
TTCCCAAGACCCCCTAACCAATTCCAAATCCCATTTTCAAATCCACCTCACAACAACATCCTAGCAAATCCAGCTGCACTTTTGCCTCAG
ATATTTGGACAGGCTTTGTATAACCAATCCAAATTCTCTGGCCTCCAATCATCTCAAGATTTAGAAGGACAACAACACCCTTCAACGATG
CCATCCTCGATTAATCCATCCAACCACAATCCTGTAGCTGACACGGTGAACGCCTTAACCAGTGATCCTAATTTCACCGCAGCATTAGCA
GCAGCCATCACTTCACTTATTGGCAATCCGGGGCAACCAAACAATGGTACCAACAACACCATCGCCACCACCACAACGCCAGCCAACAAC
AATAACAACAGTGTCACAAGCAATGGCAATAACAACAACAATGGCAGCAACAATAAAGTGACGAATTCGAGTTTTCCAGCAAACTGATTG
ATAGCTTGTCAATTAAACTGCTGCGCGCATATTTTCCTTTCAAGAAAGAAATTTTTTTCTTAAATTAATTTTTTTGCTTAACTAGTAATC
AGGAAAACTAGATTACTATACAAGTTGATAAGATTCTTTTTGTGTGTTTTAAAAAAAAATTAAAACATATAATCTTCCATTCTTTTTGTG
GCTGAATAATGTAATTCAAGATTTCTTATCAATACAAGAAAATATATTGGCAAAGGAAAAGTACAGAAATGTTCTTCCTTCTAAAAAAAA
AAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	10
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	6
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1

mRNA member sequences (19)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (10)

Annotations (manual: 1 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101416	DNA-binding WRKY - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Biological Process: regulation of transcription (GO:0045449)	230
2	118439	DNA-binding WRKY - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Biological Process: regulation of transcription (GO:0045449)	155
5	135682		3

Preceding Unigenes (1)

Unigene	Build
SGN-U215688	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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