Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U563075 and SGN-U595467 in the current build, Tomato 200607 #2

Unigene SGN-U317238

Unigene Basic Information

Unigene ID:	SGN-U317238
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	317238
mRNA sequence:	Length: 1456 bp

>SGN-U317238 Tomato 200607 #1 (3 members)
TTTCTCTCTCCTATGTCGCCGTCGGGTTATCCGGTGATATATATATTTTCATACCGGCGTATGTAATTTTGTTATTCCCACAATACCCCT
TCCTCTACGCCAATTTTCGGTTACACTTCATCAATTTTCTTCTTTCTTGCTTATGTAATTTATTTATTGCTGTCTTTTCAAAGGTATTTT
GCGATTTGTCGATCTGTTGGAGTTGAGATTCTTGATTTTCTAGTCGCCGCCGGCAGCCATGTCGGGTCCATTAGATCGGTTTGCTAGACC
TTGCTTTGAGGGGTCATCTACACATGATGAGAGAAGAGAAAGAAAGTCCGATTTTGAGAATTCAGAGGATGAGAGGAGGACGAGAATTGG
TTCCCTGAAAAAGAAAGCATTGAATGCATCAACGAAATTCAAACATTCTCTTAAGAAGAAAAGTAGTAGAAGAAAAAGCAATGGACGGTT
GAGCTCACTTTCCATCGAGGACATTCGGGATGCTGAGGAGCTACAGGCTGTTGATCAGTTTAGACAATCATTACTTTTGGATGAGTTGTT
ACCTGAAAGACACGATGACTACTATATGATGTTGAGGTTCTTAAAAGCAAGAAAGTTTGATATCGAGAGAGCCAAGCATATGTGGGCTGA
TATGCTTCAGTGGAGGAAGGATTTTGGGGCTGACACAATCACGGAGGATTTTGAATTCCCGGAGTTGGAAGAAGTTGTAAAATATTATCC
CCAAGGTTATCATGGGATTGATAAGGAGGGAAGACCAGTATACATTGAAAGATTAGGGAAAGTTGATCCTAACAAACTCATGCAAGTGAC
AACCATGGATCGTTATATAAAATACCACGTAAGGGAGTTCGAGCAATGTTTTTCGATCAAGTTTCCAGCTTGTACAATAGCTGCTAAAAG
GCAGATCGATTGTAGCACTACTATTTTGGACGTTCAGGGAGTGGGTTTGAAAAACTTTAGCAAGAGTGCAAGGGAGCTCATTTTGCGGCT
CCAGAAGATTGATGGTGATAATTATCCCGAGACGCTTAATCAGATGTTCATAATCAACGCCGGGGCTGGGTTTAGGCTTCTCTGGAATAC
TGTTAAGAGTTTTCTGGACCCCAAGACGGCCTCCAAGATACATGTTCTTGGGAACAAGTATCAGAATAAATTGCTTGAAATAATTGATGC
TAGTGAGTTGCCAGATTTCATAGGTGGTAGCTGTACATGTGCAGATCGAGGAGGTTGCATGCGTTCAGATAAAGGACCATGGCAAAATCC
AGATATATTGAAGGTGAAAGGTAGTAGTGACACCTCTACTGCTGAATCTGGATCTGAAGCTGAAGATATTGCTTCCCCAAAAGCTTTAAG
GAGTTATTCACATCTCCGGCTTACTCCTGTACGAGAAGAAGCTAAGACTATTGGAATGCCTGGCTACACGTCAAACTTCCCAGGATATGA
TGAATATGTTCCCATG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101424	Cellular retinaldehyde-binding/triple function C-terminal	202
2	118671	Phosphatidylinositol transfer protein-like N-terminal Cellular retinaldehyde-binding/triple function C-terminal Cellular retinaldehyde-binding/triple function N-terminal	37
5	129156	Phosphatidylinositol transfer protein-like N-terminal Cellular retinaldehyde-binding/triple function C-terminal Cellular retinaldehyde-binding/triple function N-terminal	35

Preceding Unigenes (2)

Unigene	Build
SGN-U233851	Lycopersicon Combined #3
SGN-U242680	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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