Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U585631 in the current build, Tomato 200607 #2

Unigene SGN-U317281

Unigene Basic Information

Unigene ID:	SGN-U317281
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	317281
mRNA sequence:	Length: 1191 bp

>SGN-U317281 Tomato 200607 #1 (21 members)
AATCGGCCGAATTCTAATTGAAATAGAAACTATTTCCTTGATGAAAATATTGAGATTTAATTTAGAATTTTAATTAAAATAGATAATTAA
TTATTTCATGAAAATGTTGAGATTTAATTTAAAGATCTAATGTTATGAATATTTAGAAATAAAATCAATGAAAAATATAAATGATATCCA
AGTGATTCAAGATTGCTCTTTCACTTTTTCGGGTCGAAGTTTCAATTTTTCCGATTCTCCCATCGCTCTGCGTCTGAGATTAGATTTTGT
CTTGAGACCCAGAAGATATGACAACGGCAGCTAGACCTACGTGGGCACCTGCTAAAGGTGGCAATGAACAAGGTGGAACCCGGATATTTG
GTCCATCTCAAAAATACTCTTCAAGAGACATTGCAGCTCACACAACATTAAAGCCCAGAAAGGAAGGACAAGACACCCAGGATGAGTTGC
AGAAGAGGAACCTCCGGGATGAGTTGGAGGACCGTGAGCGGAGGCATTTCTCTAAAGACAAGAGTTATAATGATGACAGAGATCGTCGAA
AAGGTAGTCAACTCTTTGTGGAAGGGGCTAAACGAGAGATTGAAGATCGTATTGTTCCGCGGAGTGCTGATGCTGATGATGCCGATGTGG
ATGTTAAGAGTGGTGATGAGAGTGATGACGACGATGATGATGACGATGATGAAGATGATACAGAAGCTCTCTTGGCAGAGCTTGAACAGA
TAAAGAAAGAAAAAGCAGAGGAAAAACTTCGGAAAGAAAGGCTAGAGCAAGAGGAAGAGCTTAAAGCAAAGGAGGCGGAATTATTGAGAG
GAAACCCTCTGTTAAACAACAACCAGCCAACAACTTTCAGTGTGAAGCGAAGGTGGGATGATGATGTAGTTTTCAAGAACCAAGCTCGAG
GTGAAATGAAGGCAGCTAAGCGCTTCATCAATGACACTATCCGGAATGACTTTCACAGAAAGTTTCTTCATAAATACATGAAGTGAAACA
TGTCTTTGAAAAATGCTCCTAGAGTTGGCAAATATTATAATGTCCATCCATGCTTACCATGCAGTGTACCTTCAACTTAATCGAAGCAAA
TTGAACTGTTTTGTTTTGCTATTGTAGTGTGTGTGTAAACCAAAACACTAAATCATTCTCAATTTTTATGATACTATACGTTTTATGATG
TTGAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	3
Solanum lycopersicum	LB	Leaf Mature leaves	3316	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (21)

Alignment image suppressed for unigene with 21 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101382	Armadillo-like helical - Molecular Function: binding (GO:0005488)	408
2	121154	Cwf15/Cwc15 cell cycle control protein	7
5	131395	Cwf15/Cwc15 cell cycle control protein	7

Preceding Unigenes (1)

Unigene	Build
SGN-U218295	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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