Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U582988 in the current build, Tomato 200607 #2

Unigene SGN-U317504

Unigene Basic Information

Unigene ID:	SGN-U317504
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	317504
mRNA sequence:	Length: 1653 bp

>SGN-U317504 Tomato 200607 #1 (21 members)
CTTTTCTCTCTCTTTTTCAACACGATTTTGAGAGAAGAAAAATAAATAAATCATGACTTCCGAATTGATTTATCGAGGACCGGAATCAGT
TCCGGTGACCGACGGTTACACTCCCAAACCACATAAACCATGGTTTACTGTAATTCGTCCCCTTCGTTACTTGCTCCGAGAACAGAGAAT
TGTTTTTCTATTCGCAGGCATTGCTATCGCTTCTCTAATTTTTGCTTTTTTACCGTCTTCTCGTTCCTCCGGAGGATCGAGCTACGCTAA
CACCGGGATCTACGATTCGTACTTACCGTCGGAGTCGACTGAGTCTCAGGTGGCTCACCGGATGATCTATCATAATCGGGTCGGGTTCGG
GTCGATTAATTCCGGTGGGAAGATCCCGTTGGGATTAAAGCGGAAGGTTTTGAGGATTGTGGTGACTGGTGGTGCTGGTTTTGTTGGTAG
TCATTTAGTGGATCGTTTGATTGCGAGAGGTGATAGTGTGATCGTCGTTGATAATTTCTTCACCGGACGGAAAGAGAACGTTATGCATCA
TTTTGGTAACCCTAGGTTTGAGCTTATTAGACATGATGTTGTTGAGCCACTTTTGCTTGAAGTTGACCAGATCTATCATCTCGCTTGCCC
TGCTTCTCCCGTTCATTACAAGCATAATCCCGTCAAAACTATCAAGACTAATGTAGTTGGTACTTTGAACATGCTGGGATTGGCTAAAAG
AGTCGGTGCGAGGTTTTTGCTAACCAGCACTAGCGAAGTATATGGTGATCCTTTAGAACATCCACAGAAGGAGACATACTGGGGCAATGT
TAATCCTATTGGTGTCCGAAGTTGCTACGATGAGGGAAAACGAACAGCTGAAACATTGACAATGGATTATCACAGAGGTGCAGAAGTTGA
GGTGAGAATCGCTAGGATCTTTAACACTTATGGACCTCGTATGTGTATTGATGACGGTCGCGTTGTCAGCAACTTTGTCGCTCAGGCTTT
AAGGAAAGAGCCTTTGACAGTTTATGGTGATGGGAAACAAACAAGAAGTTTCCAATTTGTTTCAGATCTGGTTGAAGGCTTAATGCGGTT
GATGGAAGGAGAACATGTCGGACCCTTCAACCTCGGAAACCCTGGTGAATTCACAATGCTTGAACTTGCTAAGGTGGTCCAGGAAACCAT
TGACCCAAATGCACAGATTGTACACAAACCAAACACAGAAGATGACCCACACAAGCGAAAACCTGATATCTCAAAGGCTAAAGAGTTACT
TGGTTGGGAACCGAAAGTGGCTCTTAGAAATGGTTTGCCTATGATGGTTCAAGACTTCAGGCAACGTATTTTCGGTGATCACAAAGAAGA
AAGTGCAAAGATCACCACAGCTTAATAGAAAAGAAAAGTGTGTTATGTTTGGATATTTGTTAAACTTGGTAAGGGGTGAAACGCACGCGA
AGAAAAGACGACTCTCTTGTGTTGATGTTAGTTTCAAGCAGAAGTGCAGGCAGCAGAAGACTGAGCTGAGCTCCCCATGTACTTCTTTTG
AATAGTTGGTTCTTTGTCAATTTTGCAATTCTATTATTAGTATTATTATCCTTTTGTTAACAGTTGATGTAGTAGACCAACTTTCATTAT
TCTCATAAGAATAAAACTGGTACGTATTTTCCC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	3
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	4
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	3
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	3
Solanum lycopersicum	cTOS	suspension cultures	8026	1

mRNA member sequences (21)

Alignment image suppressed for unigene with 21 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 2 | blast: 2 | go: 9 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101369	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	604
2	118427	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	212
5	128955	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	121

Preceding Unigenes (1)

Unigene	Build
SGN-U215820	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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