Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U566298 in the current build, Tomato 200607 #2

Unigene SGN-U317659

Unigene Basic Information

Unigene ID:	SGN-U317659
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	317659
mRNA sequence:	Length: 1351 bp

>SGN-U317659 Tomato 200607 #1 (20 members)
AAATACAAAACCCCACTTCCCCTTTTCACTTTTGCTCACTCTAAGAGCATCTAAATCAACCTTAAGAGCTGTTACAATGTCGTATGATAA
AGAACTTGATGCTGCCAAGAATGCTGCTTCTCTTGCTGCTCGCCTTTGTCAAAAAGTCCAAAAAGCACTGTTGCAAGCAGATGTTCAATC
AAAGTCTGACAAATCTCCAGTGACGGTGGCTGATTATGGCTCACAGGCCGTGGTTAGCGTTGTTTTGCAGAAAGAGTTGTGTTCTGCTTC
ATTTTCATTAGTGGCTGAGGAGGACTCTGGAGACCTTCGTAATGAAGAGGGAAAATCAACATTACAGCGTATCATGAAGCTTGTCAATGA
AACACTTGCTAGTGATGGAACATATGGTACTGCCCCATTATCTGAAGAAGATGTCCTTGCTGCCATTGATAGTGGTAGATCTGAAGGGGG
TCCTTCTGGTCAGCACTGGGTGTTGGATCCTATTGATGGTACTAAAGGGTTTCTAAGGGGAGACCAATATGCAATTGCATTGGGATTGCT
AGATGAAGGGAAGGTGGTTTTGGGCGTCTTAGCCTGTCCAAATCTTCCATTATCTTCTCTTGCCTCCCACAATCTACAGGATGATCAAGA
CAAAGTTGGTTGCCTTTTTTATGCCCAAGTTGGTTCTGGAACTTATATGCAGTCTCTTGATGGCTCTACACCAATAAAGGTGCATGTAAC
TGATTTAGACAACCCTGAAGAGGCATCTTTTTTTGAATCTTTTGAAGCAGCACATTCTTTGCATGACCTATCTAGTTTGATAGCAAAGAA
ACTTGGTGTAAAAGCCCCCCCAGTTCGAATAGACAGCCAGGCAAAGTATGGTGCTTTGTCCCGTGGAGATGGAGCAATATATCTGCGGTT
TCCTCATAAAGGCTACCGCGAGAAGATATGGGATCATGCTGCTGGATATCTCGTTGTTGCAGAAGCTGGAGGTGTTGTCTCAGATGCTGC
AGGAAACCCTTTGGACTTCTCCAAGGGAAGATACCTTGATTTACACGAAGGCATAATCGTTACCAATCAAAAGCTGATGCCTGCTCTCCT
CAAGGCTGTTAAAGAATCTTTGAATGAGAAAGCTTCATCCTTGTGATGATCAAACCAATAACAATACGCTGCAGCTATCTTATTGTAGTT
CCCAGAATGGTACTTGCAGCTGCTCATTTTCACCTGTTCTTCTCCTTCTACACATTTCTGATATCACTTTTTAGCTCTTTGATTGTCATC
TCAACTCAGCTTTGATAAACATTTTGTTGTTCTCTGGTTATGTCAACTCAACTTTGATTAAACATTATATATTTCTCTTGTTAAAAAAAA
A

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (13)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	6
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1

mRNA member sequences (20)

Alignment image suppressed for unigene with 20 aligned sequences.
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Markers Information (0)

Expression Data (1)

Annotations (manual: 1 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101800	Inositol monophosphatase - Molecular Function: inositol or phosphatidylinositol phosphatase activity (GO:0004437)	36
2	119738	Inositol monophosphatase - Molecular Function: inositol or phosphatidylinositol phosphatase activity (GO:0004437)	13
5	130776	3(2) 5 -bisphosphate nucleotidase HAL2 - Biological Process: sulfur metabolism (GO:0006790) - Molecular Function: 3'(2') 5'-bisphosphate nucleotidase activity (GO:0008441) Inositol monophosphatase - Molecular Function: inositol or phosphatidylinositol phosphatase activity (GO:0004437)	9

Preceding Unigenes (2)

Unigene	Build
SGN-U218840	Lycopersicon Combined #3
SGN-U221221	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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