Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U567312 in the current build, Tomato 200607 #2

Unigene SGN-U317781

Unigene Basic Information

Unigene ID:	SGN-U317781
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	317781
mRNA sequence:	Length: 1970 bp

>SGN-U317781 Tomato 200607 #1 (16 members)
CAAGGAAAAGTTACATCCAGGGGTGTTTGCTCTTCACCAAATTCGGCAGCAATCAAGCTGCTTTGCTCGATTTGGCTTTCCCGGATAGTT
TTGGGAAGTTGCATGACAGGGGAAAGGAAGTGACCAAGACAACTAAACTTCTGACAAAGCTTTTCCCCAACAAAGTGACCATTCACATGC
CACAGGATGAAGCGCTTTTATCTGATTGGAAGCAACAGTTGGATCGAGATGCTGATACCCTCAAAATGAAAGGAAATTTGAATAGCTTGC
GAACAGTTCTTAATCGGAATGGATTAGACTGTGATGGACTTGACACTTTGTGCATCAAAGACCAGACTTTTTCTGTTGAAAGTGCAGAGA
AGGTGGTTGGATGGGCCTTAAGCCATCATTTGATGCAGAACCCTGATGCAAATCCTGACGTGAGGCTTGTTTTGTCTCCTCTGAGCATTC
AATATGGATTGGAAATTCTACAAGCCATGCAAAATGAAAGCAAGAGCTTGAAGAAGTCACTTAAGGATATTGTGACTGAGAATGAATTTG
AAAAGAGACTTCTGGCAGATGTTATCCCCCCCAGCGATATTGGAGTAACATTTGATGATATTGGTGCGCTTGAAAATGTCAAGGATACGT
TAAAAGAGCTGGTCATGCTTCCTTTACAAAGACCGGAGCTCTTCTGCAAGGGTCAACTAACCAAGCCATGCAAGGGAATACTTCTATTTG
GACCCCCCGGAACTGGGAAAACCATGCTTGCGAAAGCAGTTGCCACTGAAGCCGGTGCAAACTTTATCAACATTTCAATGTCAAGTATCA
CTTCAAAGTGGTTTGGCGAGGGTGAGAAATATGTGAAAGCTGTCTTCTCCCTGGCTAGTAAAATTGCTCCAAGTGTCGTTTTTGTCGATG
AAGTTGATAGCATGCTGGGACGACGGGAAAATCCAGGAGAACATGAGGCCATGCGTAAAATGAAAAATGAATTCATGGTGAATTGGGATG
GATTGCGTACAAAAGATACTGAACGAGTATTGGTTCTTGCAGCGACAAACAGACCATTTGATCTTGATGAGGCTGTCATAAGGCGACTGC
CGCGTAGGCTGATGGTCAATTTACCAGATGCTCCAAATAGAGCGAAAATTCTAAAAGTCATACTTGCAAAAGAAGACTTGTCTCCAGATG
TTGATCTGGATGCAGTTGCAAGTATGACTGATGGATATTCCGGAAGTGATCTTAAGAATCTTTGTGTTACAGCGGCATATCAACCCATTA
GAGAAATCCTAGAAAAAGAAAAAAAGGAACATGCTGCAGCTATGGCAGAAGGTAGACCTACACCAACACCATGCGGCGGTGCAGACATAC
GACCTTTGAACATGGACGATTTCAAAAATGCTCACGAGCGGGTTTGTGCAAGTGTTTCATCGGAATCCATAAATATGACGGAGCTTCTTC
AGTGGAATGAACTGTATGGAGAGGGGGGCTCTAGAAGGAAGAAGTCCTTGAGTTATTTCATGTAAAAGTTGTTCATATTGTACATTGATG
TCTTAAGGAAGTTCTTAAAAATGTGATCTCCTCAGGCTCAGGTCAAGGTCAGTCGCCGCCCTTTGTGGTTTTCCATGACACCCTGGAAGT
TTGTACAATGAGTATAGGTCTCTTAAGTTATACATGAGTTTTGAGATGTAATGAGGATGGAGTAGTCCTCTAGGAATAGGTAGTATCTCC
ACCTTCATTTTCTTTACCCTCTTTCTCACAACGAGCAGAAAGATGTCGAGGTTCTTATTTTAATGCAGCTGCTACTGTTGCTATTCGTTA
TATGTCAAGTTGGAAGCAAATAATATGCAAGTCTTGTCGTTGTTTTAGATACTGACTTGGTTCTTTGGATATCTAGTTGTTGATGAGCTT
GTACTTGCCGAGTTCCAGCAAAAATACAATGAAATCCCCGGTCCCTCTATTTATTTCCTGGAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	5
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	2

mRNA member sequences (16)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (2)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101385	AAA ATPase central region - Molecular Function: ATP binding (GO:0005524)	403
2	118424	AAA ATPase central region - Molecular Function: ATP binding (GO:0005524) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	236
5	129063	AAA ATPase central region - Molecular Function: ATP binding (GO:0005524) AAA-protein subdomain - Molecular Function: ATP binding (GO:0005524) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	49

Preceding Unigenes (1)

Unigene	Build
SGN-U216999	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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