Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U576606 in the current build, Tomato 200607 #2

Unigene SGN-U317808

Unigene Basic Information

Unigene ID:	SGN-U317808
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	317808
mRNA sequence:	Length: 1469 bp

>SGN-U317808 Tomato 200607 #1 (18 members)
ACCTCCCTCTACTCCTCTCTCTCTTCCACCTTTTTCCATCTTCAGTTTCAATCGGAAATTGAAAAACTCGATTTTACTTTTTTACTTCCA
TGGATCCTCCACTTCAAGCTTTTATAGCTGCGGCTTCCAGTTTCGTTGCAGTCCTCTTGATCTTTGCTTCTCTCTATATTTTCTGCAGAA
ACCCTATCAAACGTCGTCCTATCGAAGAGGAAACCCGGAATCATCCCCGTAGCCGGAACCGGAACATCCGGGCTATAGCTAGTAGCAATA
CAGATCTTTCATCCATCACCGTAACTGAAAGTGCAACATTTGACCCGAATCTAGATCAACTCTCCATGAAGCAGCTCGCCGACGCGACCC
GGAATTTCTCACCGGAACTCATAATCGGCGACGGGAGTTTCGGGATGGTATACAAGGCAACGCTCACCTGCGGCAAGACCGTCGCCGTGA
AGAAACTCTCCGCCGACGCTTTTCAAGGGTTCCGAGAATATCGCGCGGAGATGGAAACCCTAGGTAACATCAAGCACAAAAATATAGTCA
AAATGCTCGGGTACTGCTCCACGGGTAGTGACCGGGTACTAATTTACGAGTTCATCGAAAAAGGCAGCCTCGACCAATGGCTTTACGACA
CGTCATCGACTTCCGATATGTTGGAATGGATGCCACTTCATTGGGAAACAAGGACAAAAATTGTCAAAGGAGTAGCTGAAGGACTTGCCT
ATATGCATAATTTGGATACTCCAATTATTCACAGAGATATCAAAGCCAGTAACATCTTATTAGATGCAAATTTCAATGCTTATATTGCTG
ATTTCGGATTAGCTAGAAGAATTCAAGGATCACATTTACATGTATCAACACAAGTAGCTGGAACCATGGGGTACATGCCACCAGAGTATA
TAAATGGTGCACCCATGGCTAAAACAAACGGAGATGTTTATAGTTTTGGCGTGTTAATGCTAGAGATTGTTACCGGGAGACGCCCTAATT
TCCCGTTTAAAGGAGAAGATGGTTGCGAAATTAGGCTTGTCAATTGGATTAGTGGTATGGTAGAACAAGAAAGGTTCATGGAAATGGTGG
ATGACAATCTTTCGAAGGATGAGTTGAAAGAAAGTGCAGTGGTTGAGTATTTTAGGATCGCTATGATGTGTGCTAACGAAAATTGTCACG
CTAGGCCGCCTATGAAGGAAGTCGTTAAGATTCTGGATGGAATTTCAACATTCATTTCTTCGTGAGTATTCCTAAATTCATATCTAATGT
ATCCAATTCTATGTAGTACTATTTTTAAGTTTGTACTTAGTAGTTTATATATAAAAATGTAAAAAGTAGGGCAAATTGTTGTTTTTAATT
GATTGAGAAATAAGGTATTCGGACATTATGTAAATAACAATTGCACCAATTTAGATTCTTATGTCCTAATAAAGTTTTAAGCAAGCTTGT
GGCTAGACCACATTGTCCAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	3
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	5
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	3
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	4
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1

mRNA member sequences (18)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (5)

Annotations (manual: 3 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	128927	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	615

Preceding Unigenes (2)

Unigene	Build
SGN-U216894	Lycopersicon Combined #3
SGN-U216895	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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