Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U576896 in the current build, Tomato 200607 #2

Unigene SGN-U317948

Unigene Basic Information

Unigene ID:	SGN-U317948
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	317948
mRNA sequence:	Length: 2302 bp

>SGN-U317948 Tomato 200607 #1 (18 members)
TTCTAGTTGGAGCACACAACCAGGCTTTAGAATCAGTTTTAACAGTTGAAAGCTCAAGTTGGGTATTTGACCATGCAGTTACTGATGGTG
ATCTTGATACAGATAGTAACATAAATGCAGTTCCTCACGCTAAGCAGGATTCAGAAAACAATCTCTGCGTAGAGATAACAGAAAAGGATG
GCAGACTTGTGCAGGATGAGGAGAGAGAAAAAGGAAGCATTGGGAAGAATGTTTACATTTCTTACTTGACCATTGTGAAAGGTGGTGCCT
TTATTCCAATAATTCTTCTAGCGCAATCATCATTTCAAGTGCTTCAAATAGCGAGCAACTACTGGATGGCATGGTCATGTCCCACAGGTG
ATACATCACCAATAACAGGGAAGATGAACTCCATACTTTTTGTTTATGTGCTTCTCGCTGTAGGAAGTTCTCTTTGTGTGCTAGTCCGGT
CATCAGTTTTGGCTATAGTAGGCCTTCAAACCGCAGAAAAGCTCTTTAGCAACATGCTGCACAGCATCCTTCGTGCTCCTTTGTCATTCT
TCGACTCTACTCCTACTGGAAGAATCTTAAATCGCGCATCGATAGACCAAAGTGTTCTAGACTTGAAAATGGCAAACAAGTTGGGTTTGT
GTGCCTTCTCCATTATTCAGCTTCTTGGGACAATTGCAGTCATGTCGCATGCCGCATGGGAAGTATTTGTCATCTTTATTCCAGTAACAG
CAGTCTGCATTTGGTACCAGCAATACTACATACCAACCGCAAGGGAGCTTGCTCGATTATATGGAGTTCAAAGAGCTCCGATCCTCCATC
ACTTTGCAGAATCACTCGCAGGAGCAACAACAATTCGTGCTTTCAACCAAAAAGATCGATTTGCACATGCAAACCTTTGTCTCATAGATG
GTCATTCAAGGCCATGGTTTCACAATGTATCCGCAATGGAATGGCTTTATTTTAGACTCAACCAACTAGCTAATTTTGTTTTCGCCTTCT
CCCTTGTTCTGCTAGTCACACTCCCCGAAGGAATCATAAATCCAAGCATTGCAGGATTAGCAGTAACATACGGGATCAATTTGAATGTTT
TACAAGCTTCAGTTATATGGAACATTTGCTATGTTGAAAACAAAATGATATCAGTTGAAAGGATTCTCCAGTACTCTAACCTTGCCAGTG
AAGCACCTCTTGTGATTGAAAATAGAAGACCATCAATCACTTGGCCAGAAACTGGTACAATTTCCTTCCAAAATTTGCAGATACGTTATG
CTGAACACCTCCCTTCTGTTTTGAAAAACATAACATGCACATTGCCAGGAAGTAAGAAATTTGGTGTTGTGGGCAGAACAGGAAGTGGTA
AATCAACCCTCATTCAGGCTCTTTTCCGTATTATAGAACCCCAAGAAGGAAGCATTATTATTGATGATGTCGATATTTGCAAGATTGGCC
TTCATGATTTGAGGTCAAGGCTTAGTATTATTCCTCAGGATCCAACAATGTTCGAGGGAACAGTTAGAGGAAACCTAGATCCAGTTTCAC
AATACTCTGATACTGAAATCTGGGAGGCTCTGGACAAATGTCAACTTGGCAATATAGTACGTGCAAAGCCAGAGAAACTAGAATTTACAG
TGGTTGAAAATGGAGAAAACTGGAGTGTTGGTCAAAGGCAACTTTTCTGTCTTGGAAGGGCCTTGTTGAAGAAAAGCAGTATTCTTGTTC
TGGATGAAGCAACAACATCACTTGATGCAGTAACAGATGAAGTGTTGCAAAAGATTATCAGTCAAGAGTTCAGAAATCAAACAGTCATCA
CGATAGCTCACAGAATCCACAGAGTCATTGATAGTGATTTTGTCTTGGTCTTGAATGAAGGAAGAATAGCTGAATATGACACACCAGCAG
GGCTATTGGGAAGACATGATTCTTTATTCTCCAAATTGATAAAGGAGTATTCAATGAGATCAAAAAAATTAATAGCTTAGCTATATTACA
GACTTGATCTTCATTTCTACATTCTGCAAAAAGCAGTGAAAGAAGAAACAAATGATAACAGAAAGCTAAAGCTTTGATAAAAGCTGAAAA
ATCGATATTCTTATCACTATGCCATAGGATGTTGAAAATTATGTAAGCTTAGTTCAGTATAGTGAAAAACTGAACACAAAATGAAGAATA
CACACATCCCAGCATTGGAACTTTGTAAGATTTTGTAGACTTCGTTTTCGAAATTACCAATAATTATGTTCAATTCAAACTTGCAGTTTG
GGAGAGGTTATGTTGATGATGCATATATAATTTTTTGAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	5
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	5

mRNA member sequences (18)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (4)

Annotations (manual: 1 | blast: 2 | go: 7 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101386	ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887)	388
2	118590	ABC transporter transmembrane region type 1 - Molecular Function: ATP binding (GO:0005524) - Biological Process: transport (GO:0006810) - Cellular Component: integral to membrane (GO:0016021) - Molecular Function: ATPase activity coupled to transmembrane movement of substances (GO:0042626) ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887)	47
5	129077	ABC transporter transmembrane region type 1 - Molecular Function: ATP binding (GO:0005524) - Biological Process: transport (GO:0006810) - Cellular Component: integral to membrane (GO:0016021) - Molecular Function: ATPase activity coupled to transmembrane movement of substances (GO:0042626) ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887)	46

Preceding Unigenes (1)

Unigene	Build
SGN-U217780	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer