Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U570259 and SGN-U570260 in the current build, Tomato 200607 #2

Unigene SGN-U318101

Unigene Basic Information

Unigene ID:	SGN-U318101
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318101
mRNA sequence:	Length: 2269 bp

>SGN-U318101 Tomato 200607 #1 (18 members)
ATTTGCCTAATATAATTTTCCAAAATTTCAAAGGTAGGAAGATGGAAGCATCTGCCAGTATAACACGATTGTCCTAACTCGTATACACTC
TATTATTGCTACTTCCTTCCTTGCATCAATCTGTACCAATAAAAATAGGAGGGAGAATATTGGAGAAGAGAGAAAGCGTGGAATGCTGAG
ATCTTGTGGTAGAATCAATACGAAAGTTTAGGGGAGAAGTTGGGTTGTGTATATGGGGGGTAGTAGTACATTTGTTGATGGAGTTCTTCG
ATGGTTTCATCATCGTCGTCACACTAATGAAGATGCAATCTTGACTCAAACCCACAATTCTACAGATACCCATTTACAAGAAAAACAACA
CGAATTTACTATTACTGAAGACTTTGACTTCACCGGTTTAAAGCTCATCAAAGTACCCAAGCGTTTTCATTTGCCTATTTCTTCTTCTTC
TTCTTCCATGGATCCTACCAAAAAGAATGCGTTAGAGACGGAATTCTTTACTGAATATGGAGAGGCAAGTAGATACCAAGTTCAGGAAGT
AATTGGCAAAGGAAGCTATGGAGTTGTGGGTTCTGCTGTTGATACACATACTGGTGAAAGAGTTGCAATCAAGAAAATTAATGATGTCTT
TGACCATGTTTCTGATGCGACAAGAATCTTGAGAGAAATTAAGCTTCTTCGGCTACTTAGGCATCCAGATATCGTAGAAATAAAGCACAT
TATGTTGCCTCCTTCTCGAAGAGAGTTTAAAGATATTTATGTTGTTTTTGAATTGATGGAATCTGATCTCCATCAAGTAATTAAGGCCAA
TAATGATCTTACACATGAGCATTATCAATTTTTCCTCTACCAGCTTCTGCGTGGACTAAAATATATTCATACAGCAAATATCTTCCACAG
GGATTTAAAGCCGAAAAATATCCTTGCTAATGCTGACTGTAAGTTGAAGATATGTGATTTTGGGCTTGCTCGTGTATCATTCAATGATGT
GCCATCAGCTATTTTCTGGACCGATTATGTTGCAACTCGATGGTATCGTGCTCCTGAGCTATGTGGATCCTTCTTTTCTAAGTATACTCC
TGCTATTGATATATGGAGCATCGGATGCATATTTGCAGAGTTGCTTTCTGGAAAACCATTATTTCCTGGAAAGAATGTGGTGCATCAATT
GGACCTAATCACAGATTTGCTTGGGACACCTCCTCCAGAAACAGTTGCAAAGATAAGAAATGAAAAAGCTAGAAGATACCTCAGTAGCAT
GCGGAAGAAACAACCGGTTGGGTTTGCAAAAAAGTTTCCAAATGCAGATCCTTTGGCATTACGCCTACTTGAACGACTGCTTGCATTTGA
CCCTAAAGATCGGCCATCTGCAGAAGAGGGATTAGAGGATCCTTATTTCCATGGTTTATCAAATGCTGATCGTGAACCATGTAGACCACC
AATATCGAAGCTTGAGTTTGAATTTGAGAAGAGGAAACTGGCAAAAGATGATGTTAGAGAACTCATATATCGCGAGATTTTAGAATATCA
TCCGCAGATGCTTCAGGAGTATCTTTCTGGTGCAGATCAGACTAGTGGCTTTATGTACCCAAGTGGTGTTGATCGATTCAAGCGACAATT
TGCACATCTTGAGGAGCATGCTGGTAAAGGTGAACATGGTGCTCCGATTCTGAGGCAGCATGCTTCCTTGCCTAGAGAGCGAGTACCTGC
ACCAAAAGATGACACCTCTTCCCAAAATAATGATTGTGAAAAGAAAACTGTTTCAACAACTCTACAGAGTCCACCAACGCAATCTGAGGG
ATCAGAGAACTACAGTGCTCGTAGCTTGCTGAAGAGTGCTAGCATCAGTGGTTCCAAGTGTGTGGAAGTAAAAAGAAAAAACGCAGAGGA
AGAGCCAATCGAAGAACAAAATGAAGAAGTTGATGGTTTGTCTCAAGAAGTTGCTTCTCTTCATGTTTAATTCTCTGCAGAAATCAACAT
TTTGAAGTTTCAGTCCTTGATTTCAGCTAGAAGCTAACTGTAGGTTATCAGTTCCTATTGTGTTATAAAATATTACTTGCTATATATAGT
AGGAAAACACTCTAGCTATTCAAATTTTCTCATTAGATTACAAGGTTTCAAATTTGTAACGATTTCATAAACACTACTTCCTCTACCCTA
ACTAACAGTCTTTCTTAAATATCGTTCCTTGTATGCTCATGTACTTTACCTGCGTGTTGCGTGGATAATATTGAAGAGAACAACATTATA
CATTAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (12)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	3
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	2
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	2

mRNA member sequences (18)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (2)

Annotations (manual: 2 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118420	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	253
5	128957	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	116

Preceding Unigenes (1)

Unigene	Build
SGN-U216717	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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