Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U577614 and SGN-U578129 in the current build, Tomato 200607 #2

Unigene SGN-U318104

Unigene Basic Information

Unigene ID:	SGN-U318104
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318104
mRNA sequence:	Length: 1787 bp

>SGN-U318104 Tomato 200607 #1 (17 members)
TCCAAAGCACTCCCCATTTCCACATTTTCCAATAACACCATTAGCCTTTCTTTCGTATACTCTCTGCAATATCAAAGCGATAAATAAATC
AAATTGATATATCATATACATATATAAAGTTATGAAAACTATAATGGCATCGCCACCTGACACAAGCAAAACCACAAAACTAGAGCGCTA
CAATAGCTATATTCGAAGAGTTAATAGTACAAAACTCATCGCTGCATCGTCTAAGCTTTTATTTCGTGTCACTTTATTAGTGGCTCTTTT
ACTTATTTTCTTCTTCACTATAAATTACCCTCCGTTAACTTCCGAAAAATCATTCAACAATAATATTCACACCACTACCCATAACCTTCT
ATCCTCCGCGATTTACGGCGGTGGGGCGTCGTGGGAGAAACAAGTTCGTCACTCCTCGACACCCCACCGCCCTAACGGGCTATCCGTCCT
CGTGACGGGAGCAGCTGGCTTCGTTGGTTCTCATTGCTCCTTAGCATTGAAGAAGCGTGGTGATGGTGTTTTAGGTTTAGATAATTTCAA
TTCATACTACGATCCTTCGTTGAAACGTGCTCGTCAAGATCAGTTATTGAAGCATCAGATTTTCATTGTAGAAGGTGATATTAACGATAC
AGAGCTTCTGAAAAAGCTTTTCGACATTGTTCCTTTTACTCATATCCTTCATCTAGCTGCACAAGCAGGTGTTCGTTACGCGATGCAGAA
TCCTCTCTCTTATGTAAACTCAAACGTAGCTGGGTTTGTAAATCTGTTAGAAATTGCTAAAGCTGCAGATCCACAACCGGCGATAGTCTG
GGCTTCATCGAGCTCTGTTTACGGATTGAACACCAAAGTTCCTTTCTCCGAAGATCACAGAACAGATCAACCAGCTAGTTTATACGCTGC
AACGAAGAAAGCAGGGGAAGCAATTGCACATACATATAACCATATCTACGGGCTTTCATTAACAGGTTTGAGGTTTTTCACTGTTTACGG
ACCTTGGGGAAGACCAGACATGGCGTATTTCTTCTTCACAAAGGATATGATTCAGGGGAAATCGATTAACGTGTACGTCACTCAGGATGA
TAAAGAGGTGGCGCGTGACTTCACGTACATTGATGATATAGTAAAAGGATGCGTCGGCGCGTTGGATACGGCGGAGAAGAGCACCGGGAG
CGGCGGAAAGAAGAGAGGTCCGGCTCAATTGAGGGTTTACAATTTGGGGAATACTTCGCCAGTGTCGGTGAAGAAGTTGGTGGCAATTCT
CGAAAATTTATTGAATCTTAAGGCTAAAAAGAATGTTGTTAAAATGCCACGAAACGGCGACGTTCCGTATACACATGCCAACGTGAGCCT
GGCGTTAAGGGATTTTGGGTATAAGCCAACAACTGATTTGTCAAGTGGGTTAAGGAAATTTGTGAAGTGGTATGTTAGTTATTATGGGAT
TCAATCAAGGGTAAAAAAGGAAAGTGAAGGGGAAAAGTGAAAAAGACTATTTTTACCTTTTATTTTATTTTATTTTTGTTTTTCATGATG
TAATATTTGGGTCAAAATTATGTTTACTTGTTTATTTTTAGTATAGGAATAGAATTTTATATTTATAAAAAAAATAAGAAAATTAGAGAA
GGGTGGAAATGGCAAGTGTAGATCTATGAAAAGTGGGGTTTATAATAATGTACTTTTTAAAGGTATTATTGGATGTAGGATTTAAGAAAA
AAAAATCAATCATAAATTGTAATATTTTGGAACAAAAATGATGATTCCATCAAGATTAATCTTATGTCTTTTATCTT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	4
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	4

mRNA member sequences (17)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 10 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101369	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	604
2	118686	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287) Nucleotide sugar epimerase - Biological Process: carbohydrate metabolism (GO:0005975) - Molecular Function: racemase and epimerase activity acting on carbohydrates and derivatives (GO:0016857)	35
5	129150	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287) Nucleotide sugar epimerase - Biological Process: carbohydrate metabolism (GO:0005975) - Molecular Function: racemase and epimerase activity acting on carbohydrates and derivatives (GO:0016857)	35

Preceding Unigenes (2)

Unigene	Build
SGN-U218051	Lycopersicon Combined #3
SGN-U221621	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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