Sol Genomics Network

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This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U575358 in the current build, Tomato 200607 #2

Unigene SGN-U318145

Unigene Basic Information

Unigene ID:	SGN-U318145
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318145
mRNA sequence:	Length: 1301 bp

>SGN-U318145 Tomato 200607 #1 (18 members)
TCTTAAGCAAATAATTGAGCAATGGTAGAAGTCCATCCAGCAATCATCCAAGATGTCGAACACAGGCCAGATCTCACCAAAAGTACTGAA
GCAGAGGGCATTCCAGTGATTGATCTCTCAATACTGAATTCTCCAGACACATCGACTGACGCGGAGTTATCAAGTCTAGTTGGTGAAATA
AGAAATGCATGCAAGGAGTGGGGATTCTTCCAAGTGATCAATCATGGGGTGTCCTTAGAGTGCAGGGAAAAGATAGAATTGGCATCAAGA
AAGTTCTTTGCTTTACCTAAAGAGGAAAAGATGAAAGTGAAAAGAAATGAGGTGAACTTCATTGGATATTATGATGCTGAGCTAACCAAA
AAGATCAGGGACTGGAAAGAAGTCTTTGATTTTACTGTTGAGAAGACAGCTATGGTCCCACTTTCTCAAGATCCTAATGACAAGGACCTC
AGGGACTTTCAGAACCAATGGCCTCAGTACCCTCCAGGATTAAGGGAGGTGTGTGCAGAGTATATTCAAGAAATGCAAAAGTTGGCTAAC
AAGTTAGCAGAACTGATATCACTCAGCTTAAGCTTGCCAGCAAAAAGGCTGAATGAGTTCTTTGAAGACCAAATTGTTTTTGGAAGGATA
AATCATTATCCTCCTTGTCCTGTCCCTCATCTGGCTTTAGGAGTTGGTAGACACAAAGATGCTGGTTTATTCACCATTTTGTGTCAAGAT
GATACCGGAGGGCTTGAAATAAAGAGGAAAACTGATGGAGAATGGATAGGAGTTAAACCTACTCCTGATGCATACATTGTAAATCTTGGT
GACGCTACACAGGTGTATAGCAATGATGAATATGAGAGTGTGGAACATCGCGTTGTGCTGAACACTGAAAGGAGTAGATATTCAATTCCT
TTCTTTGTCAATCCATCGCATAGTACTTGGATACAACCCTTGGAGGAGAAGGTCAATGAGAAGAACCCTGCAAAGTATAAGCCCTATAAC
TGGGGAATGCTTTTCACTCATCGCAGAAAACACGATCCCAAGACGCGTGATGAGGAAAACCTTACACTTGATCATTTCATGGCTTGAAAC
AAATCAATTTTATGTTTATGTCTTCTTCAAGTAAATGTGTCATGTAATATAAATAATAACATCTTTATTAGTGTCTATGTCTACTTAATT
TCCTATATGTGTAATCCCAGCAAAATGTGTCAATGTAATCGTTTTCATCCCATCTTATATTATAATGCTTAATGTGATCTTATCTTTGGC
TTAACATTCAAAAAAAAAAAAAAAAAACTCGAGGGGGGCCC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	6
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	8
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1

mRNA member sequences (18)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101380	2OG-Fe(II) oxygenase	456
2	118413	2OG-Fe(II) oxygenase	345
5	128945	2OG-Fe(II) oxygenase	159

Preceding Unigenes (1)

Unigene	Build
SGN-U216201	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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