Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U564486 and SGN-U564487 in the current build, Tomato 200607 #2

Unigene SGN-U318303

Unigene Basic Information

Unigene ID:	SGN-U318303
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318303
mRNA sequence:	Length: 2141 bp

>SGN-U318303 Tomato 200607 #1 (16 members)
TGATCTAAGCCGTCGATCTGAGATATGGATAGGATCGTCGGAGGTAAATTCAAGCTCGGCCGAAAAATCGGTAGTGGATCGTTTGGTGAA
ATTTTTCTCGCTACGCATATTGATTCATTTGAGATCGTCGCTGTCAAAATTGAGAACAATAAGACCAAACATCCTCAACTTCTCTACGAG
GCCAAGTTATACAATATTCTCCAGGGAGGAAGTGGTGTACCACATATAAAATGGTCTGGTGTGGATGGTGATGACAACGTTCTGGTCATG
GATTTATTGGGTCCTAGCTTGGAAGATCTCTTTGTCTATTGTGACCGGAAGCTTTCATTGAAGACTGTTTTAATGTTGGCGGACCAGATG
ATCACCAGAATCGAATATGTACATTCTAAGGGCTTTCTACACAGGGATATTAAGCCTGACAACTTTCTGATGGGTCTTGGTCGGAAAGCA
AATCAAGTTTATATTATTGATTTTGGTCTTGCTAAAAGATACCGTGATGCGACTACAAATCGCCATATTCCTTACAGAGAGAACAAAAAT
TTAACTGGAACAGCACGCTATGCCAGTTGTAATACTCATCTCGGAATTGAGCAAAGCCGGCGGGATGATTTAGAATCTCTTGGATATGTT
CTCCTTTATTTCTTGAGAGGCAGCCTCCCATGGCAGGGTCTAAAAGCTGCCACAAAGAAGCAAAAGTATGACAAAATATGTCAAAAGAAG
TTATCAACTCCTATTGAGGTTTTATGCAAGTCTCATCCTGTTGAGTTTGCTTCGTACTTCCACTACTGTCATTCGTTGACATTTGATCAG
CGACCTGATTATGGATTCTTAAAGCGCCTCTTTCGTGAACTTTTTACTCGTCAAGGATATGAGTTTGATTACATATTTGATTGGACCATC
CTAAAGTACCAACAGGCACAAACAAGTAAACCACAGCATCGGCAAGTTGGTGGTGAAAGTAGCCGAGCAATTCCAATGGATGTTGAAAAG
CGTCAAGTTTCTACAGGCAACAATGGACCTTATGTTGCTGAGGTGACTGATCGTCTAAGGCCGAATAACCCTTCCAGTCCTGGAATTCGT
ATGCAATTTAAGTCACCAACAAACAGGAATTTAACTTCTGCCAATCTTGAGAGAAATGTATTAAGTAGTGCTCATATGCCATCTTCTTCA
TTGGCTCCTGTTTTACCAAGAGCAAATGCTACAAAACCTGTTTTACCCACTGAAACAACACATGATGGTGATAACGGAGGCAGCAGCTGG
ATGTCCTCCTTGCGACGTATTTCTTCTGCAAAGTGATAAAAAGGATAAGATGAAGATGAAGTTGAAGTTGGGGCTAGTGAGCCTTCAAAT
TGGGCAGCTGATACTTACTTTATGATTACAAGCTGGTTCGGATGACTATGGTGGCTGATCATGGCCCGCTGCAATTTTATGAGTTCAAGA
GGGTGGTGTGAATTGAGCAGGACATGAAAGCAGATGGCAGCTGTTTGTCTTTCTATGGGAGCTCGGGAATCATTCCATTTGATGATATGC
CCGTGAGATGTTGTTTCTGTCGGTGTAATGATTCCCCTTGAATTCAATCAACTCCAGAAGAAGATTAACTAGTGATTGCATTGTTTGGTT
TGTTGATTGTGCGAGGGATCAAGTATTCACTGGTTCCTTGGTACCATTCTTCTGCCTGAGCTTATATTCCTGCTCCCAAGTGTCTCTGCT
TCTAGACTTGCTAGGTTCGTTCGTGATGAAATCATGCTGGAAAACTTCATATCATCGAGTAATGAAGCTTCTGAATGAAGTATGAACTGA
ATATCTAGTCGTATTGGACTTGTTCAGGACTTGAGGCTGGGAGTTTCGACACCCAAAGTTCGTGCTGATTTCGTTTTCAGCAAGGCTTAT
GGTGCACCCATCATGGTGCTGGAAGAATATTTGGTTACATATTTGAGTCACAGGTTATATAAATAATCAGTAAGTGTCCGTTTAGCATTG
AAATATTCCTCTCATTATTTGCATAACCAAAGAATACTTGGTTACACATTTAATATTTCTATTATCGGATGTCATTAGGGGCAAAAATAA
TTTTATCACTTGATAAAAGCGACGTATTTCAGTATATATTTCATATTATTACGTTTAGTTTTTCTTTTAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	LE15	Fruit 15 days post anthesis	269	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	5
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (16)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (2)

Annotations (manual: 1 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118569	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	51
5	129076	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	46

Preceding Unigenes (2)

Unigene	Build
SGN-U217559	Lycopersicon Combined #3
SGN-U239050	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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