Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U582301 and SGN-U587960 in the current build, Tomato 200607 #2

Unigene SGN-U318361

Unigene Basic Information

Unigene ID:	SGN-U318361
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318361
mRNA sequence:	Length: 2084 bp

>SGN-U318361 Tomato 200607 #1 (16 members)
TTGGGTTTACTGCGTAATTTAATGGCGGAGCTAAGATTTTTATATAATTTTTTGATAGGTGAAAGTATTAACTTTTTTGTACCTACCTGT
CTCCGCCTCTTATGGAGTGTATATATATATATATATATATAAATTAAAAAAATATAGAGGGTTTCAACTGGGGTTGGCTTTACCTTGTCA
ATTTATGGAGTTATAAGCAAGTAGTAGAGGAAGTTGTCAATTATTAATTCCTTAAAGGTGGGAACTTGGAAAGGGGAAGCAATTATTGTC
TCTTAAGAGCTGTTTTCACCTCTCTTTAGAGACTTATTATTTGTTGAGGTACTGAAAGTGAATCAAACGTTGTCCATCTTATCTCGAAGT
CTAAGTATAAAAAATGGTAATGGATTTCAAAGAATTCTTCACTGAATATGGTGAGGCTCATCAATATGAAATCCAAGAGGTCGTTGGCAA
GGGAAGCTATGGTGTTGTTGCAGCAGCAATTGATACTCATACTGGAGAGAAGGTAGCAATAAAGAAGATCAAAGATGTTTTTGAGCACAG
CTGTGAAGCCACCCGCATCCTGAGAGAAATAAAGCTCCTTCGGTTGCTTCGGCACCCAGATATTGTAGAAATAAAGCATATACTGTTGCC
TCCATGTCCAAGGGAATTCAAGGATATTTATGTTGTTTTCGAGTTGATGGAATGTGACCTTCAGCATGTAATTAAAGCAAATGACAGTCT
CACTGCTGAACATTATCAATTCTTTATGTATCAGCTTCTTCGTGGTTTAAAATATATGCATACAGCAAACGTGTTCCATCGGGATTTGAA
GCCAAAGAACATTCTAGCAAATGCAGATTGCAAGCTGAAAATTTGTGATTTTGGGCTTGCTCGGGTATCACTTGGCGATAACCCATCTGC
TGTTTTCTGGACTGACTACGTGGCAACTCGCTGGTACCGTGCTCCAGAACTCTGTGGTTCCTTTTTTTCCAAATATACCCCAGCAGTTGA
TATCTGGAGTCTAGGGTGTATATTTGCAGAAATGCTCACAGGAAAACCATTATTTCCGGGGAAAAATGCGGTTCACCAATTGGATCTCAT
AACTGATTTGCTTGGTACACCGTCCACTGAAGCCATTTCAAGGATTAAAAATGAAAAAGCAAGGAGATATTTAAGCAGCATGAAGAAGAA
AGCACCTATCCCTCTCTCACAGCAATTCCCACACGTTGATCCACTAGCTCTAAGATTACTTGAGCGGTTGATTGCATTTGATCCCAAAGA
TCGCCCTTCTGCTGAAGAGGCGCTAGCACATCCATATTTCCGTGGTTTGGCCAACAAGGAACAGGAACCATCATCTCAGACCATCTCAAA
ATTCGAATTCGACTTTGAACGAAGAAAACTTGGGAAAGAGGATATTAGGGAGCTCATCTACCGAGAGATTCTGGAATATCACCCTCAAAT
GCTGCAGGAGCATCTTCATGGCACTGATCACACTCACTTTATGTATCCAAGTGGGGTTGATTGCTTCAAACAACAATTTGACCATCTCGA
GGGGCAAAGTGGTAGAGGTGGAAGTACTCTCTTTCCAAGACGATATGCTTCTTTGCCCAGAGAACGAGTCTGTGCTTCCACAGAGGAGGA
AGCTGATAAGGATGGTGAATTTGAAAGGCATGTTGTAGCTTCTATGGCTCAGAGATGCCTTCCAAGCCCCCCGAGTTCCCCCAAGGTCAA
GAAACCGGATATTGCTAATACAGTTGAAGGTCCTAATGAGGCTGTCCATAGTACACCAACGAATACTGAACGCTGCATGCTAAGAAGTTC
TAGTATTAGTTTTTCCAAATGTGTTGGGGCCATATGGGACTGCGAGGTAAGTGTTTTCTGAACTATAAGAAGAAAAACACTAAATCAATC
TACTATCAGCTATGCCCCAATCTAAAATTAGCCGTGCTTAGGAAAGCCTGTATTTTAAAAATATAGTAACATATAACTCAGCCAAAGTAT
AGGGAGTAGACCTAACATGCTTGCTAATCACTTCACATTTTTTTCGTTATTTGAACGAACAATAGGTAAAAGAAATATGAGTTGCAGGAA
AATGATATATGAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	4
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2

mRNA member sequences (16)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118420	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	253
5	128957	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	116

Preceding Unigenes (1)

Unigene	Build
SGN-U216729	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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