Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U574688 in the current build, Tomato 200607 #2

Unigene SGN-U318460

Unigene Basic Information

Unigene ID:	SGN-U318460
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318460
mRNA sequence:	Length: 1677 bp

>SGN-U318460 Tomato 200607 #1 (15 members)
AAAAAATAATATGGATCCTCCATCAACGAAGAGCTGGAGCATCCATACCCGAAAAGAGATCACCGTCAAATACGAAATCTTCAATCGGAT
CGGCGCCGGAGCATATTCCGATGTATACAAAGCTCGAAGGAGATCGGATTCTGTCACCGTCGCTCTGAAAGAAATCCACGATTATCAATC
TGCGGCTCGGGAAATCGAAGCGTTACAGACGCTTCAGCATTGTCCAAACGTTGTCGTTTTACATGAGTATTTCTGGAGGGAGGATGAAGA
TGCGGTGCTTGTATTGGAGTATTTGCATACAGATTTGGATTGTCTTATTAAGGAAGCGAAGAAATGGGAAAAGGGATTGAGTTTAGGGGA
GATTAAGAGATGGATGATGCAGATTTTATGTGGAGTTGATGCTTGTCACCGGAATTCGATTGTACATAGAGATTTGAAGCCTTCGAATTT
GTTGATTTCTTCTGATGGGATCCTCAAATTGGCTGATTTTGGACAGGCTAGAATACTACTGGCCCCCGGGTTTGTAGCTAATGACAATCA
ACAGCCGTATGTACAAAGCACTCCTTATCAGGGAACTGTGGCTGGTCCATCACATTTCAAACACATATCAGATGTGTCTTCTGAAGGAGG
TGTATTTATTGAAGATCCAGGATCTACGGTTCAAGCAGCCCGTCTTGGAGAGTCAGATGAGCTTAGATTCAGGCCCTTCGATGACACTGA
TAAAGATAGTAATATTCAAGATGGGGACACATCCTGTCTAGCTACCGGAACCATGAGTTATGTTGAGGAAGATCTCTTACCAGGCACATA
TTCGTATGATGTTGACGATGGTGAGCAGGATTGCTTTCCTCCACTTACATCTTGTGTTGGAACTCGTTGGTACAGGGCACCTGAGCTACT
CTACGGATCCACTAGGTATGGGCCAGAGATTGATTTGTGGTCACTAGGCTGTATTTTTGCAGAGGTTTTGCGTTTGGAGCCACTTTTTCC
TGGAAATGCTGATATTGATCAAATAGGCAGAATTTTAAGTGTTCTGGGGAACTTATCTGAAGAAGTCTGGCCTGGTTGTGCGGATCTTCC
TGATTACAAGCTTATGTCATTCGGTAAAGTAGATAATCCAATTGGCTTAGAAGCATGTCTATCGAACAGGTCAAATGATGAAATTCTTCT
CGTCAAAAAGTTGCTATGTTATGACCCGGCTGGTAGAGCTACTGCAATGGAATTACTCCACGACAAGTATCTAAACGAAGATCCCTTGCC
AGTCCCATCGTCTGAATTGAGGATTCCCTCCAAACACAGCTCTGAAAATGATGATTCACCTGAAGAATTTCATAGAGATCTGAACTCCGA
CTCAGACTTTGATGATTTTGGCCCAACGAAGGTTTCAACCACGGATCATGGTTTCTCAATTCAGTTTTCGTGAGCTAGGAAGTCCGTTTT
TATTTTTCAGAATTTGTTCTCCAGACTACCGCGTGATGATCAACATCATCTTTTGCTGCAGACTATTTAAACTATGCAGCACTTCATATA
TTTTGTTGGAAGAGATTCTCAAGTTTTTGCAAGTTGTAACAATTATGGCGTCCATTATTGGAATACCAAATAGAGAAACAGAGACATATT
TATACACTTTACTAATATATATTATCATTGTGATTTCAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	12
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1

mRNA member sequences (15)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (6)

Annotations (manual: 1 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118420	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	253
5	133851	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4

Preceding Unigenes (1)

Unigene	Build
SGN-U216818	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Description:
Event Web URL:

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