Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U574491 and SGN-U595402 in the current build, Tomato 200607 #2

Unigene SGN-U318472

Unigene Basic Information

Unigene ID:	SGN-U318472
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318472
mRNA sequence:	Length: 1258 bp

>SGN-U318472 Tomato 200607 #1 (9 members)
CAGCATTGTTCAGCAAGTTGGGTGTTCCCATCAAAACGACTGTGTCTGCTAATGTTCTTGAAGAAGCTTTGAATGGAACTGTCACAATCC
GCCCTCTTCCAATCGGGACGTCTCTTAGTGGAAAGGTTGAAAAGCAAAGTGCCCATTTTTTCGGTGTAACGATTAGCAATGAACAAGCGG
AGGCAGGGCTTGTAGTTAGAGTTACTTCAGCAGCTCAAAGCAAGTTTAAGCTACTGTATTTTGAACAAGATGCAAATGGAGGTTATGGCC
TGGCTTTGCAGGAAGATAGTGAAAAAACAGGTAAAGTAACGTCAGCAGGAATGTATTTCCTGCATTTTCAGGTGTACAGAATGGATTCAA
CTGTAAATGCGTTAGCAATGGCTAAGGACCCTGAAGCTGCTTTCTTTAAGAAACTGGATGGCCTTCAACCTTGTGAGGTCTCAGAACTAA
AAGCTGGCACTCACATATTCGCTGTTTATGGAGATAATTTCTTTAAGCCAGCTACTTATATTATTGAGGCTCTTTGTGCCAAGTCATATG
AGGATACTACTGTTAAGCTCAAGGAAATCGAGGCTCAGATTTTGAGGAAGAGAAATGAGCTTCGGCAGTTTGAAATCGAATATAGAAAGG
CATTGGCACACTTCCAGGAAGTAACCAACAGATACAGCCAAGAGAAGCTGTCTGTCGATGAGATGCTGAAACAAAGAGACAGTATACACT
CTTCATTCACAGTTTCAAGGTCAATTGCTAATCTAAGCGGCAGTGGAAGCGGGCATTTCAGTAATGGAAGTAGCAGTAAAGTCCCTGGCG
AAGATTATAAAACCGATAGTCCAGGGGAAGATGGAAGCTCAGACTCCAAAGACAAGTCATCAAAGAAAAGATGGTTCAACCTTAACCTTA
AAGGATCAGATAAAAAGAACTGAAAAGTCGACGATCATCTAAGTTCTATACTTGATCCCAAATCTTAAAGAGTTCTTGCATTGCTATCAA
ACGCCAAGGGGGCAGGTATTGCGCTGCCGGAACAAGTCCCTTCATATATTCTTTGTTCTATTTGTTAGTTTGTGCTTTTCCCAGATTCAT
TTTGTCTTTAGGGAAGTGATGTTTGGAATATATATATATATATATATAGATGGTGTTTTTGGTGTTTGTATGCATGATTCTTGTGATGTA
CCATGAACTTGGCTGATCTTCAGCTGTCAATCCATATAAGATTATAGAATTCGGAAGGTGTTGTAATTTTAAGCTATGTACATTTTCT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101369	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	604
2	119168	Heat shock protein DnaJ - Biological Process: protein folding (GO:0006457) - Molecular Function: heat shock protein binding (GO:0031072) - Molecular Function: unfolded protein binding (GO:0051082) Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	19
5	129518	Heat shock protein DnaJ - Biological Process: protein folding (GO:0006457) - Molecular Function: heat shock protein binding (GO:0031072) - Molecular Function: unfolded protein binding (GO:0051082) Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	19

Preceding Unigenes (2)

Unigene	Build
SGN-U219877	Lycopersicon Combined #3
SGN-U234244	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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