Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U565135 in the current build, Tomato 200607 #2

Unigene SGN-U318779

Unigene Basic Information

Unigene ID:	SGN-U318779
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318779
mRNA sequence:	Length: 2315 bp

>SGN-U318779 Tomato 200607 #1 (15 members)
TCCATAAAAATGGAGTTAGTGATACAAGAAAAAAACAAACTCTGCTTAGCTACTTGTAGTTGATGTTGCAGGCCGCCAGGCCACAACAGC
TTTTTAGATTCTATCAAAAATGTCTTGGAAGCAAAGTCTTTTATAACCGTTGAATGGTTCTTGAGATGAAGATTTCGTGAATGAACTACT
CTTTGTGATTTGACAACAAGAAATGAGGGGTCGAAAGGAAGCTGCAATTGCTCTCATCATTACCTTGGTGTGGATACAGAAAATTGTTGG
CGATGAACAAGTGCATAATGCATCTGTAACAAGTAATTGGACCTGCAGCTGTCTCGCCAACCCAAGTTTTTCTGTTCCCGAAAACTGTTC
ATCATCATGTGATTGCACTATTGACGAATCAAGCAAGAACAAATGGATATGTATATGTGCAGTTGATGGATTTCCTAAAGTGGCTGCTGA
TCATAATCACAGCAGTTGTTTTACAGCCTGTGATTGTCGTTACGGAACTCAACTTGAAATGCAGTCTGCAAAGAAGAAGATATCCAGCAA
AGTTATTTTGGTCATTCTCTTACTATGTGCGGCGGTCATCACTCTTGGTTTCGTTGCTTCGATGTTGTGCTATGCCTATAGAAGGGATAA
ATATTCTATTCAACGATCTCTATTTTCGTCCGACAAAGATACAAGTTGCAACAGTGCTACCAACTTAATACTAAGCCAAGCAACTTCAAT
TGGAGAACATGGAGGATACACGGGTTCCTCCAATTGTATTACAGGTTGTGTTCCCAAAGCATCCAATCTTTTCAAAAGAAAACCAGAAGT
GTTTTATGGAACGATTATTCAATTTTCATATGCTGACTTAGAGAGTGCAACTAATAAGTTCTCTGATTCCAATTTGATTGGGGTGGGAGG
AAGCAGCCGCGTCTACCGTGGTTATTTCAAAGATGGAAAAACTCTGGCAATTAAACGAATTAAAACTCAGGCAGGACAGGACGGTGACTT
TGCTTTCTTGACGGAGATTGAACTCATTTCAAGACTTCATCATCGTCATGTGGTTCCGTTGCTTGGCTACTGCTCCGAGCATCACGGTAA
ACATGCAGAGAGGCTGCTTGTTTTCGAATTCATGGAAAATGGCAATCTGAGAGATTGTCTGGATGGGGCTTCTGGGAGACATCTGGATTG
GAGCACACGGGTTGCAGTTGCTTTTGGAGCTGCGCGTGGCTTGGAGTATCTTCATGAAGCAGCTGCACCAAGAATCTTACACCGCGATGT
TAAATCTACTAACGTCCTACTGGATGATAACTACAGAGCTAAGATTACTGATCTTGGTATGGCAAAGCACCTCCAAAATGATGGTATTCC
TAGCTGTTCCAGCTCTCCTGCGCGGATGCAGGGGACATTTGGCTATTTTGCACCTGAATATGCAATTATCGGAAGAGCTTCTCTGAAATC
GGATGTTTTTAGCTTTGGAGTTGTGCTACTTGAACTGATAACTGGACGACAACCAATCCATAAGTCAGCCAACAAAGCAGAAGAGAGCCT
CGTGATATGGGCCACGCCTCGTCTACTAGACAGTAAACGTGTGGTCTCAGAATTGCCTGATCCAAATCTGAATGGAGAATTTGAAGAGGA
AGAATTGCAGGTCATGGCTTACTTGGCTAAGGAGTGTCTTCTACTGGACCCTGATTCTCGGCCAACTATGAGTGAGGTTGTTCAAATTTT
GTCAACTATTGCACCTGAAACATCTAACCGGAAACACTTCTCGAGAGATGACTTCAAGGGCTCATTCAGTTATGACAACAAGAGTAATGG
AGAAAGTTCGGGCTTTGTTGAAGCCGAGGAGATCAAGCAAATCACATCAGAGAATCGCGCAGCTCACTGTTTGTTGCCAAATTGTGCTTT
CATTCATTGTAGAGTATCTAATGATCCAAAAGAAGACGTTATTCCAGCAGCATATGTCGAAAATCTGCTGCTCCAGAGTTCAAATTCCAA
AAGTTGGAGTTTACATGATGATGAATCAGTTGATTTAACTGAACCGCGATTTGAGAAATTTCATATGCCAACTGTGAGAGTGTGAGATCA
CCAGAAAACAGTACACATGAACAAGTGTATTGTTCATGTATTAGAGAATTACAAAAGTTTGGTTAAATGATTACGCGCTAAAAGGGCATT
TTTTTGATTTGATATAAACAAGTTTACGATAGTCATCTTTCTTTTGTAAATGATCCCACGTTAGTCTGTATACATCACACTTTTTGGGGT
GCGACCCTTTCTTGAATTATGCTAAGACGTGATGCTTTATGCAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	cTSD	seed	1504	1

mRNA member sequences (15)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	128927	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	615

Preceding Unigenes (2)

Unigene	Build
SGN-U219355	Lycopersicon Combined #3
SGN-U228773	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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